Factsheet for Bra009122.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 4
mitochondrion 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70141	Canola	plasma membrane, plastid	96.74	97.54
AT5G05630.1	Thale cress	plasma membrane	78.21	78.37
VIT_02s0033g01310.t01	Wine grape	plasma membrane	68.43	69.85
Solyc08g078100.1.1	Tomato	plasma membrane	65.17	68.38
PGSC0003DMT400067464	Potato	plasma membrane	64.56	67.73
VIT_02s0033g01320.t01	Wine grape	plasma membrane	64.77	67.23
PGSC0003DMT400047497	Potato	plasma membrane	64.15	67.16
KRH07711	Soybean	plasma membrane	63.34	65.75
Bra023210.1-P	Field mustard	golgi, peroxisome, plasma membrane, plastid	66.6	65.66
GSMUA_Achr4P11590_001	Banana	plasma membrane	41.14	64.54
GSMUA_Achr1P27820_001	Banana	plasma membrane	56.42	64.12
KRH76400	Soybean	plasma membrane	63.34	63.99
Bra023209.1-P	Field mustard	plasma membrane	58.66	63.72
GSMUA_Achr9P23200_001	Banana	plasma membrane	39.71	62.7
TraesCS6D01G245700.1	Wheat	plasma membrane	61.3	60.44
EES13409	Sorghum	plasma membrane	60.49	60.24
KRH39685	Soybean	cytosol, peroxisome, plasma membrane, plastid	63.14	60.08
Zm00001d024516_P001	Maize	plasma membrane	60.29	60.04
Solyc08g005540.1.1	Tomato	cytosol, peroxisome, plasma membrane	64.77	60.0
Solyc08g075710.2.1	Tomato	plastid	64.77	59.55
TraesCS5A01G022700.1	Wheat	mitochondrion, plasma membrane	59.88	59.39
TraesCS5B01G019600.1	Wheat	mitochondrion, plasma membrane	59.88	59.39
TraesCS5D01G028100.1	Wheat	plasma membrane	59.67	59.19
HORVU5Hr1G006170.3	Barley	golgi, plasma membrane	60.08	58.53
Zm00001d017728_P001	Maize	plasma membrane	62.12	58.1
TraesCS6A01G269200.2	Wheat	plasma membrane	61.71	57.39
OQU85562	Sorghum	peroxisome, plasma membrane, vacuole	62.73	57.25
Os02t0700500-01	Rice	cytosol, peroxisome, plasma membrane	60.9	56.31
TraesCS6B01G296500.2	Wheat	plasma membrane	60.69	56.12
Os03t0576900-01	Rice	plastid	59.88	53.45
Bra038217.1-P	Field mustard	golgi, plasma membrane, vacuole	51.93	53.35
Bra022433.1-P	Field mustard	plasma membrane	51.32	52.61
HORVU6Hr1G068230.1	Barley	plastid	61.1	52.17
Bra027411.1-P	Field mustard	plasma membrane	41.14	42.35
Bra001514.1-P	Field mustard	plasma membrane	40.33	41.51

Protein Annotations

Gene3D:1.20.1740.10	MapMan:24.2.3.5.1	InterPro:AA/rel_permease1	EnsemblPlantsGene:Bra009122	EnsemblPlants:Bra009122.1	EnsemblPlants:Bra009122.1-P
GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628	GO:GO:0015171
GO:GO:0015203	GO:GO:0015839	GO:GO:0015846	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	GO:GO:1902047	UniProt:M4CY25	PFAM:PF13520	PIRSF:PIRSF006060	PANTHER:PTHR11785
PANTHER:PTHR11785:SF338	TMHMM:TMhelix	UniParc:UPI0002544C4A	SEG:seg	:	:

Description

AT5G05630 (E=2e-217) | amino acid permease family protein

Coordinates

chrA10:+:15324049..15325524

Molecular Weight (calculated)

53024.6 Da

IEP (calculated)

8.778

GRAVY (calculated)

0.633

Length

491 amino acids

Sequence
(BLAST)

001: MTDLSSSSLR SEAHKPTGNS PPPPPPPPPG HVSISLTPPS PTPPSATTTN LRKISLLPLI FLIFHEVSGG PFGIEVTVKA AGPLVSILGL IIFPFIWSIP
101: EALITAEMGT MFPENGGYVV WVSSALGPYW GFQQGWVKWL SGVIDNALYP ILFLDYLQSG LPVISSGLPR VASVITLTFA LTYLNYRGLS IVGVAAVAIG
201: VFSILPFVVM CLVSIPKVEP LRWLVVSEKM KGVDFGLYLN TLFWNLNYWD SIGTLSGEVV SPSETLPKAL FYALLLVVLS YIFPVLSGTG ALPLDQRRWT
301: DGYFADVGKV IGGGWLGWWI RAAAAASNMG MFLAEMSSDS FQLLGMAERG MLPEVFARRS RYGTPWVGIL FSASGVVVLS WLSFQEIVAA ENLLYCFGMV
401: LEFVAFVRLR VKYPAASRPF KIPVGVLGSV IMCVPPTVLI GFIAAFSDLK VAGVSLAAVV IGLVLQPCLK KVEKKGWLKF SVSSHLSDLM A

Best Arabidopsis Sequence Match ( AT5G05630.1 )
(BLAST)

001: MTELSSPNLD SASQKPRIST ENPPPPPPHI SIGVTTGDPA TSPARTVNQI KKITVLPLVF LIFYEVSGGP FGIEDSVKAA GPLLAIVGFI VFPFIWSIPE
101: ALITAEMGTM FPENGGYVVW VTLAMGPYWG FQQGWVKWLS GVIDNALYPI LFLDYLKSGI PILGSGIPRV AAILVLTVAL TYLNYRGLSI VGVAAVLLGV
201: FSILPFVVMS FMSIPKLKPS RWLVVSKKMK GVNWSLYLNT LFWNLNYWDS VSTLTGEVEN PSKTLPRALF YALLLVVFSY IFPVLTGTGA IALDQKLWTD
301: GYFADIGKVI GGVWLGWWIQ AAAATSNMGM FLAEMSSDSF QLLGMAERGM LPEVFAKRSR YRTPWVGILF SASGVIILSW LSFQEIVAAE NLLYCFGMVL
401: EFITFVRLRM KYPAASRPFK IPVGVLGSVL MCIPPTVLIG VIMAFTNLKV ALVSLAAIVI GLVLQPCLKQ VEKKGWLKFS TSSHLPNLME

Arabidopsis Description

RMV1Polyamine transporter RMV1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFL1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.