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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • golgi 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:golgi
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G269200.2 Wheat plasma membrane 97.79 92.23
TraesCS6B01G296500.2 Wheat plasma membrane 97.19 91.15
HORVU6Hr1G068230.1 Barley plastid 95.38 82.61
Os02t0700500-01 Rice cytosol, peroxisome, plasma membrane 84.14 78.91
Zm00001d017728_P001 Maize plasma membrane 82.13 77.9
OQU85562 Sorghum peroxisome, plasma membrane, vacuole 83.73 77.51
GSMUA_Achr1P27820_001 Banana plasma membrane 62.05 71.53
PGSC0003DMT400047497 Potato plasma membrane 66.67 70.79
Solyc08g078100.1.1 Tomato plasma membrane 66.47 70.73
PGSC0003DMT400067464 Potato plasma membrane 66.27 70.51
VIT_02s0033g01310.t01 Wine grape plasma membrane 68.07 70.48
KRH07711 Soybean plasma membrane 65.66 69.13
KRH76400 Soybean plasma membrane 67.27 68.93
KRG90652 Soybean plasma membrane 64.26 68.67
VIT_03s0038g02860.t01 Wine grape plasma membrane 66.06 67.98
CDY63076 Canola endoplasmic reticulum, plasma membrane, vacuole 49.8 66.13
Bra023210.1-P Field mustard golgi, peroxisome, plasma membrane, plastid 65.66 65.66
CDY12285 Canola golgi, peroxisome, plasma membrane, plastid 65.66 65.66
TraesCS5D01G028100.1 Wheat plasma membrane 64.86 65.25
VIT_02s0033g01320.t01 Wine grape plasma membrane 61.85 65.12
KRH39685 Soybean cytosol, peroxisome, plasma membrane, plastid 67.27 64.92
AT1G31830.1 Thale cress golgi, mitochondrion, plasma membrane 64.46 64.85
PGSC0003DMT400008784 Potato plasma membrane 60.24 64.52
Solyc08g005540.1.1 Tomato cytosol, peroxisome, plasma membrane 67.87 63.77
Solyc01g111800.2.1 Tomato plasma membrane 58.84 63.56
AT5G05630.1 Thale cress plasma membrane 62.25 63.27
Solyc09g092420.1.1 Tomato plasma membrane 36.14 63.16
CDX70141 Canola plasma membrane, plastid 61.24 62.63
CDX98852 Canola plasma membrane, plastid 61.24 62.37
Solyc08g075710.2.1 Tomato plastid 66.87 62.36
AT1G31820.1 Thale cress plasma membrane 60.24 62.24
KRH36101 Soybean plasma membrane 33.13 61.34
Bra009122.1-P Field mustard plasma membrane 60.44 61.3
Bra023209.1-P Field mustard plasma membrane 55.22 60.84
CDY12286 Canola plasma membrane 45.78 58.31
TraesCS5D01G085800.1 Wheat golgi, plasma membrane, vacuole 49.2 50.62
TraesCS7D01G452600.1 Wheat golgi, plasma membrane, vacuole 40.76 41.34
TraesCS5D01G321300.1 Wheat golgi, peroxisome, plasma membrane 40.76 40.76
TraesCS4D01G344800.1 Wheat plasma membrane 40.56 39.84
KRH57856 Soybean cytosol 18.67 38.59
TraesCS5D01G531700.1 Wheat mitochondrion, plasma membrane 40.36 38.51
TraesCS5D01G321500.1 Wheat golgi, mitochondrion, plasma membrane, plastid, vacuole 13.05 33.85
TraesCS5D01G321700.1 Wheat plasma membrane 12.85 33.33
Protein Annotations
EnsemblPlants:TraesCS6D01G245700.1EnsemblPlantsGene:TraesCS6D01G245700Gene3D:1.20.1740.10GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0015203GO:GO:0015846GO:GO:0016020GO:GO:0022857
GO:GO:0055085InterPro:AA/rel_permease1PANTHER:PTHR11785PANTHER:PTHR11785:SF434PFAM:PF13520PIRSF:PIRSF006060
SEG:segTMHMM:TMhelixMapMan:24.2.3.5.1:::
Description
No Description!
Coordinates
chr6D:+:347996026..347997934
Molecular Weight (calculated)
53303.6 Da
IEP (calculated)
5.183
GRAVY (calculated)
0.586
Length
498 amino acids
Sequence
(BLAST)
001: MSSLLQQKPA QNGGPATGAA PAMGEEGTEY RGLPGGAGAG AAPAPSPASL SIVPLIFIIF YEVSGGPFGI EDSVGAAGPL LAIAGFLALP VIWSVPEALI
101: TAELGTMFPE NSGYVVWVAS ALGPYWGFQQ GWMKWLSGVI DNALYPVLFL DYLKSGVPAL GGGAPRTGAV LGLTALLTLL NYRGLTVVGW AAISLGVFSL
201: LPFLVMGFIS IPKLRPARWL EVDLHNVDWN LYLNTLFWNL NYWDSISTLS GEIRNPAKTL PKALFYAVIF VVVGYLYPLL TGTGAVPLDR EQWTDGYFAD
301: IAKLLGGAWL MWWMQAAAAM SNMGMFVAEM SSDSYQLLGM AERGMLPAFF ATRSRYGTPL VGILFSASGV LLLSTMSFQE IVAAENFLYC FGMLLEFLSF
401: VLLRVRRPDA PRPYRVPLGT AGCVAMLVPA TALIVAVLAL STLKVALVSL GAVAVGLVLQ PVLKFVEKKR WLRFSVNSDL PGIDVNHQPA APDEPLIV
Best Arabidopsis Sequence Match ( AT1G31830.1 )
(BLAST)
001: MQKRRIITVN PSASIEMSQY ENNEVPYSSV GADEVPSSPP KATDKIRKVS MLPLVFLIFY EVSGGPFGVE DSVNAAGPLL ALLGFVIFPF IWSIPEALIT
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR
Arabidopsis Description
Probable polyamine transporter At1g31830 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S5]
SUBAcon: [mitochondrion,plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.