CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g092420.1.1	Tomato	plasma membrane	34.44	29.12
KRH07711	Soybean	plasma membrane	43.57	22.2
KRH76400	Soybean	plasma membrane	43.57	21.6
KRG90652	Soybean	plasma membrane	40.25	20.82
Solyc01g111800.2.1	Tomato	plasma membrane	39.42	20.61
KRH36101	Soybean	plasma membrane	22.82	20.45
KRH39685	Soybean	cytosol, peroxisome, plasma membrane, plastid	43.57	20.35
VIT_03s0038g02860.t01	Wine grape	plasma membrane	39.83	19.83
GSMUA_Achr1P27820_001	Banana	plasma membrane	35.27	19.68
PGSC0003DMT400008784	Potato	plasma membrane	37.76	19.57
TraesCS6D01G245700.1	Wheat	plasma membrane	38.59	18.67
TraesCS5D01G028100.1	Wheat	plasma membrane	38.17	18.59
TraesCS5A01G022700.1	Wheat	mitochondrion, plasma membrane	38.17	18.59
TraesCS5B01G019600.1	Wheat	mitochondrion, plasma membrane	37.76	18.38
Zm00001d024516_P001	Maize	plasma membrane	37.34	18.26
HORVU5Hr1G006170.3	Barley	golgi, plasma membrane	38.17	18.25
EES13409	Sorghum	plasma membrane	36.93	18.05
TraesCS6A01G269200.2	Wheat	plasma membrane	38.17	17.42
Zm00001d017728_P001	Maize	plasma membrane	37.76	17.33
TraesCS6B01G296500.2	Wheat	plasma membrane	38.17	17.33
Os02t0700500-01	Rice	cytosol, peroxisome, plasma membrane	37.76	17.14
OQU85562	Sorghum	peroxisome, plasma membrane, vacuole	37.76	16.91
Os03t0576900-01	Rice	plastid	38.17	16.73
HORVU6Hr1G068230.1	Barley	plastid	38.17	16.0
KRH77938	Soybean	plasma membrane	31.54	15.73
KRH58913	Soybean	plasma membrane	31.12	15.56
KRH42817	Soybean	plasma membrane	30.29	15.11
KRH72395	Soybean	plasma membrane	28.63	14.68
KRH16786	Soybean	plasma membrane	27.8	13.93
KRH45451	Soybean	plasma membrane	12.03	13.36
GSMUA_Achr4P11590_001	Banana	plasma membrane	10.79	8.31
GSMUA_Achr9P23200_001	Banana	plasma membrane	9.96	7.72

Protein Annotations

EMBL:ACUP02003065	EnsemblPlants:KRH57856	EnsemblPlantsGene:GLYMA_05G088600	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0008150	GO:GO:0015179
GO:GO:0015297	GO:GO:0016020	GO:GO:0055085	GO:GO:1902475	PANTHER:PTHR11785	PANTHER:PTHR11785:SF338
ProteinID:KRH57856	ProteinID:KRH57856.1	UniParc:UPI000296F2D7	UniProt:K7KNV3	MapMan:24.2.3.5.1	:

Description

hypothetical protein

Coordinates

chr5:-:19161051..19162352

Molecular Weight (calculated)

26667.5 Da

IEP (calculated)

6.508

GRAVY (calculated)

0.047

Length

241 amino acids

Sequence
(BLAST)

001: MVIKLNVDVD PTVTEVGAVE LAGAKATMEG GEIGDRRKKI VEGGKIKVAA QPSEIASAGG ARQRGCTGER RDDMVLRIHN KKIDHSLRIF KMFHHNPFEI
101: LLHGGHCKEV RACKLQGAQG GDFQSIAVNK INCCLVDLNY WDSISTLAGE VVLGYFPPVL VATGVVPLNR ELWIDEYFSI IADIVGGVWL RWWLQAVAVM
201: SNMEMFVAEM SSDSFQLLGM AERGMLLEFF GKRSCYETPY S

Best Arabidopsis Sequence Match ( AT1G31830.1 )
(BLAST)

001: MQKRRIITVN PSASIEMSQY ENNEVPYSSV GADEVPSSPP KATDKIRKVS MLPLVFLIFY EVSGGPFGVE DSVNAAGPLL ALLGFVIFPF IWSIPEALIT
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR

Arabidopsis Description

Probable polyamine transporter At1g31830 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S5]
SUBAcon: [mitochondrion,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.