CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 1
mitochondrion 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plasma membrane, vacuole
Any Predictor:	nucleus, peroxisome, plasma membrane, vacuole
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017728_P001	Maize	plasma membrane	91.26	93.52
TraesCS6D01G245700.1	Wheat	plasma membrane	77.51	83.73
Os02t0700500-01	Rice	cytosol, peroxisome, plasma membrane	81.04	82.11
TraesCS6A01G269200.2	Wheat	plasma membrane	80.3	81.82
TraesCS6B01G296500.2	Wheat	plasma membrane	78.62	79.66
HORVU6Hr1G068230.1	Barley	plastid	79.93	74.78
GSMUA_Achr1P27820_001	Banana	plasma membrane	58.18	72.45
PGSC0003DMT400047497	Potato	plasma membrane	63.01	72.28
Solyc08g078100.1.1	Tomato	plasma membrane	62.64	72.01
PGSC0003DMT400067464	Potato	plasma membrane	62.45	71.79
VIT_02s0033g01310.t01	Wine grape	plasma membrane	63.75	71.31
VIT_03s0038g02860.t01	Wine grape	plasma membrane	63.01	70.04
KRG90652	Soybean	plasma membrane	60.41	69.74
KRH76400	Soybean	plasma membrane	62.45	69.14
KRH07711	Soybean	plasma membrane	60.41	68.71
EES13409	Sorghum	plasma membrane	62.08	67.75
Bra023210.1-P	Field mustard	golgi, peroxisome, plasma membrane, plastid	62.45	67.47
CDY12285	Canola	golgi, peroxisome, plasma membrane, plastid	62.27	67.27
AT1G31830.1	Thale cress	golgi, mitochondrion, plasma membrane	61.34	66.67
PGSC0003DMT400008784	Potato	plasma membrane	57.06	66.02
CDY63076	Canola	endoplasmic reticulum, plasma membrane, vacuole	45.91	65.87
VIT_02s0033g01320.t01	Wine grape	plasma membrane	57.81	65.75
KRH39685	Soybean	cytosol, peroxisome, plasma membrane, plastid	63.01	65.7
Solyc08g005540.1.1	Tomato	cytosol, peroxisome, plasma membrane	63.94	64.91
Solyc01g111800.2.1	Tomato	plasma membrane	55.58	64.86
Solyc09g092420.1.1	Tomato	plasma membrane	34.01	64.21
CDX70141	Canola	plasma membrane, plastid	57.99	64.07
AT5G05630.1	Thale cress	plasma membrane	58.18	63.88
AT1G31820.1	Thale cress	plasma membrane	57.06	63.69
CDX98852	Canola	plasma membrane, plastid	57.62	63.39
Solyc08g075710.2.1	Tomato	plastid	62.64	63.11
KRH36101	Soybean	plasma membrane	31.41	62.83
Bra009122.1-P	Field mustard	plasma membrane	57.25	62.73
Bra023209.1-P	Field mustard	plasma membrane	51.67	61.5
CDY12286	Canola	plasma membrane	42.94	59.08
EES16229	Sorghum	plasma membrane	45.35	49.69
EER92207	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	21.0	44.84
EER92206	Sorghum	plasma membrane	40.52	43.95
OQU92528	Sorghum	plasma membrane	37.55	40.89
KXG39283	Sorghum	plasma membrane	38.66	39.92
KRH57856	Soybean	cytosol	16.91	37.76

Protein Annotations

Gene3D:1.20.1740.10	MapMan:24.2.3.5.1	UniProt:A0A1Z5RP75	InterPro:AA/rel_permease1	GO:GO:0003333	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0015203
GO:GO:0015846	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	GO:GO:1902047
EnsemblPlants:OQU85562	ProteinID:OQU85562	ProteinID:OQU85562.1	PFAM:PF13520	PIRSF:PIRSF006060	PANTHER:PTHR11785
PANTHER:PTHR11785:SF434	EnsemblPlantsGene:SORBI_3004G270400	TMHMM:TMhelix	UniParc:UPI000B8BAFEB	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:+:61466369..61471944

Molecular Weight (calculated)

57330.2 Da

IEP (calculated)

4.775

GRAVY (calculated)

0.551

Length

538 amino acids

Sequence
(BLAST)

001: MGEGYTQSEV LLAVLHDHQQ GSTATSPATP PPPVEAASDT GQQEKLAAEN TAPAAGTAAM GECSTEYRGL PDANGEDAGS VPVPAALRKV SIVPLVFLIF
101: YEVSGGPFGI EDSVGAAGPL LAIVGFLALP VIWSIPEALI TAELGTMFPE NGGYVVWVAS ALGPYWGFQQ GWVKWLSGVI DNALYPVLFL DYLKSAVPAL
201: GGGPPRTFAV LGLTAVLTML NYRGLTVVGW VAICLGVFSI LPFFVMGLIS LPRLRPARWL VVDLHNVDWN LYLNTLFWNL NYWDSISTLS GEVENPGKTL
301: PKALLYAVIF VVVGYLYPLL AGTGAVPLDR GQWSDGYFSD LAKLLGGAWL MWWVQAAAAL SNMGMFVAEM SSDSYQLLGM AERGMLPAFF ARRSRHGTPL
401: VGILFSASGV LLLSSLSFQE IVAAENFLYC FGMLLEFIAF VLLRVRRPDA PRPYRVPLGT AGCVAMLVPP TALIVVVLAL STLKVALVSL GAVAVGLVLQ
501: PALRFVEKKG LLRFAVNSDL PDIGVGRSPA SAEEPLAP

Best Arabidopsis Sequence Match ( AT1G31830.1 )
(BLAST)

001: MQKRRIITVN PSASIEMSQY ENNEVPYSSV GADEVPSSPP KATDKIRKVS MLPLVFLIFY EVSGGPFGVE DSVNAAGPLL ALLGFVIFPF IWSIPEALIT
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR

Arabidopsis Description

Probable polyamine transporter At1g31830 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S5]
SUBAcon: [mitochondrion,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.