CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
golgi 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029321_P001	Maize	plasma membrane	88.31	90.12
TraesCS7B01G365600.1	Wheat	golgi, plasma membrane, vacuole	73.59	75.41
TraesCS7A01G464900.1	Wheat	golgi, plasma membrane, vacuole	72.58	74.84
TraesCS7D01G452600.1	Wheat	golgi, plasma membrane, vacuole	73.79	74.54
Os03t0375900-01	Rice	plasma membrane	30.65	73.43
TraesCS5B01G533500.1	Wheat	plasma membrane	72.38	73.12
Os03t0375966-00	Rice	cytosol, golgi, peroxisome	45.16	71.79
HORVU7Hr1G106710.2	Barley	cytosol, plasma membrane	74.4	71.79
TraesCS5D01G531700.1	Wheat	mitochondrion, plasma membrane	73.19	69.54
EER92207	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	34.68	68.25
OQU92528	Sorghum	plasma membrane	55.44	55.67
KXG39283	Sorghum	plasma membrane	57.86	55.09
VIT_06s0004g00790.t01	Wine grape	plasma membrane	52.22	54.53
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	50.6	54.09
CDY23626	Canola	plasma membrane	51.41	53.68
VIT_06s0004g00800.t01	Wine grape	plasma membrane	52.02	53.42
PGSC0003DMT400028298	Potato	mitochondrion, plasma membrane	50.6	53.4
KRH72395	Soybean	plasma membrane	50.6	53.4
CDX75722	Canola	plasma membrane	29.03	53.33
CDX97502	Canola	plasma membrane	51.21	53.25
Bra027411.1-P	Field mustard	plasma membrane	51.21	53.25
PGSC0003DMT400082048	Potato	plasma membrane	50.6	53.07
Solyc01g005920.2.1	Tomato	plasma membrane	50.81	53.05
KRH58913	Soybean	plasma membrane	51.21	52.7
CDX75721	Canola	plasma membrane	50.6	52.62
CDX82530	Canola	plasma membrane	50.6	52.62
Solyc01g034080.1.1	Tomato	plasma membrane	49.8	52.55
Bra001514.1-P	Field mustard	plasma membrane	50.0	51.99
KRH16786	Soybean	plasma membrane	50.4	51.98
KRH42817	Soybean	plasma membrane	50.6	51.97
AT3G13620.1	Thale cress	plasma membrane	49.8	51.67
PGSC0003DMT400082047	Potato	plasma membrane	48.39	50.21
KRH45451	Soybean	plasma membrane	20.16	46.08
EES13409	Sorghum	plasma membrane	41.13	41.38
EES16229	Sorghum	plasma membrane	40.32	40.73
OQU85562	Sorghum	peroxisome, plasma membrane, vacuole	43.95	40.52

Protein Annotations

Gene3D:1.20.1740.10	MapMan:24.2.3.5.1	EntrezGene:8080481	InterPro:AA/rel_permease1	UniProt:C5WYM7	EnsemblPlants:EER92206
ProteinID:EER92206	ProteinID:EER92206.1	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171
GO:GO:0015203	GO:GO:0015297	GO:GO:0016020	GO:GO:0022857	GO:GO:0055085	GO:GO:1902047
PFAM:PF13520	PIRSF:PIRSF006060	PANTHER:PTHR11785	PANTHER:PTHR11785:SF378	EnsemblPlantsGene:SORBI_3001G357500	unigene:Sbi.397
TMHMM:TMhelix	UniParc:UPI0001A821D9	RefSeq:XP_002465208.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:64728850..64733201

Molecular Weight (calculated)

51578.9 Da

IEP (calculated)

9.036

GRAVY (calculated)

0.626

Length

496 amino acids

Sequence
(BLAST)

001: MTTRDAHLGV GVGVEGDAKD KNAAADALTD GGGGHEGAGS GGGRKLSLVP LIFLIFFEVA GGPYGAEPAV QAAGPLYALL GFLIFPFIWA IPEALVTAEL
101: STAIPGNGGY VLWADRAFGA LPGSLMGTWK YVSAAINGAA FPALCADYLA RVAPAVSGGP ARAATIVAFN VLLTAVNCAG LTVVGWSAVG LGVASLSPFL
201: VMSGAALPKI RPRRWRVVAR ERDWKLFFNT LFWNLNYWDS VSTMAGEVDR PGKTLPKALV SAVSMTSLGY LLPLLAATGA LDVAPDSWGN GFFADAAGMI
301: AGNWLKYWIE VGAVLSSIGL YSATLSSAAF QLLGMADLGL LPGFFASRAP VFRTPWVSIL ATAAITLAMS FLSFNSIVAA ANFLYSLGML LEFAAFVWLR
401: VKQPALARPY RVPARLPGAV LLCLVPSVFL VFVMAIAGWK VYAISAAFTA AGVAVYYLMR LCKARGCLRF SDGAGAGDQG STAAVYQQGS SNGGDV

Best Arabidopsis Sequence Match ( AT3G13620.1 )
(BLAST)

001: MAISEASKSS HELPVTTAES SGKKATAKKL TLIPLVFLIY FEVAGGPFGE EPAVQAAGPL LAILGFLIFP FIWSIPEALI TAELSTAFPG NGGFVIWAHR
101: AFGSFVGSMM GSLKFLSGVI NVASFPVLCV TYLDKLFPVL ESGWPRNVCI FASTVVLSFL NYTGLAIVGY AAVVLGLVSL SPFLVMSAMA IPKIKPHRWG
201: SLGTKKKDWN LYFNTLFWNL NFWDNVSTLA GEVDEPQKTF PLALLIAVIF TCVAYLIPLF AVTGAVSVDQ SRWENGFHAE AAEMIAGKWL KIWIEIGAVL
301: SSIGLFEAQL SSSAYQLEGM AELGFLPKFF GVRSKWFNTP WVGILISALM SLGLSYMNFT DIISSANFLY TLGMFLEFAS FIWLRRKLPQ LKRPYRVPLK
401: IPGLVVMCLI PSAFLVLILV FATKIVYLIC GVMTIGAIGW YFLINYFRKT KIFEFNEVID DLDNNVNGEH PKVDDHNS

Arabidopsis Description

PUT4 [Source:UniProtKB/TrEMBL;Acc:A0A178VLM5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.