Skip to main content
crop-pal logo
Rice
Search for another protein from :
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • golgi 4
  • plasma membrane 4
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:golgi, plasma membrane
Predotar:secretory
PProwler:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
 plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH45451 Soybean plasma membrane 43.96 41.94
Zm00001d029321_P001 Maize plasma membrane 74.88 31.89
EER92206 Sorghum plasma membrane 73.43 30.65
TraesCS7B01G365600.1 Wheat golgi, plasma membrane, vacuole 69.08 29.55
TraesCS7A01G464900.1 Wheat golgi, plasma membrane, vacuole 68.12 29.31
TraesCS7D01G452600.1 Wheat golgi, plasma membrane, vacuole 68.6 28.92
TraesCS5B01G533500.1 Wheat plasma membrane 67.63 28.51
HORVU7Hr1G106710.2 Barley cytosol, plasma membrane 69.08 27.82
TraesCS5D01G531700.1 Wheat mitochondrion, plasma membrane 67.15 26.63
GSMUA_AchrUn_... Banana cytosol, peroxisome, plasma membrane 57.49 25.65
VIT_06s0004g00790.t01 Wine grape plasma membrane 52.17 22.74
KRH58913 Soybean plasma membrane 50.24 21.58
KRH42817 Soybean plasma membrane 49.76 21.33
VIT_06s0004g00800.t01 Wine grape plasma membrane 49.28 21.12
PGSC0003DMT400028298 Potato mitochondrion, plasma membrane 47.34 20.85
KRH72395 Soybean plasma membrane 46.86 20.64
Solyc01g005920.2.1 Tomato plasma membrane 47.34 20.63
PGSC0003DMT400082048 Potato plasma membrane 46.86 20.51
PGSC0003DMT400082047 Potato plasma membrane 46.86 20.29
Solyc01g034080.1.1 Tomato plasma membrane 45.89 20.21
Bra027411.1-P Field mustard plasma membrane 46.38 20.13
CDY23626 Canola plasma membrane 45.89 20.0
CDX97502 Canola plasma membrane 45.89 19.92
KRH16786 Soybean plasma membrane 44.93 19.33
AT3G13620.1 Thale cress plasma membrane 43.96 19.04
CDX82530 Canola plasma membrane 43.48 18.87
CDX75721 Canola plasma membrane 43.48 18.87
Bra001514.1-P Field mustard plasma membrane 43.0 18.66
Os12t0580400-01 Rice plasma membrane 36.72 15.32
Os02t0700500-01 Rice cytosol, peroxisome, plasma membrane 36.23 14.12
Os03t0576900-01 Rice plastid 32.85 12.36
Os03t0375300-02 Rice nucleus 17.39 6.58
Os03t0375966-00 Rice cytosol, golgi, peroxisome 4.35 2.88
Os03t0374900-00 Rice peroxisome, plasma membrane, vacuole 3.38 2.12
CDX75722 Canola plasma membrane 1.45 1.11
Protein Annotations
Gene3D:1.20.1740.10MapMan:24.2.3.5.1InterPro:AA/rel_permease1ProteinID:BAF12132.1ProteinID:BAS84406.1GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:Os03g0375900EnsemblPlants:Os03t0375900-01PFAM:PF13520PANTHER:PTHR11785
PANTHER:PTHR11785:SF378UniProt:Q0DRK6TMHMM:TMhelixUniParc:UPI0000E120A6SEG:seg:
Description
OsLAT4Amino acid/polyamine transporter I family protein. (Os03t0375900-01)
Coordinates
chr3:-:14836140..14838125
Molecular Weight (calculated)
21835.0 Da
IEP (calculated)
9.575
GRAVY (calculated)
0.803
Length
207 amino acids
Sequence
(BLAST)
001: MNTYAGMIAG GWLKYWIEVG AVLSTIGLYS ATLSSAAFQL LGMADLGLLP RAFALRAPVF DTPWVGILAT AAITLAMSFT SFDTIVASAN FLYSLGMLLE
101: FAAFVRLRAR LPAMPRPYAV PLRGLPAAAA LCAVPSAFLV FVMAIAGWKV YAISAVFTAA GVAVYYLMDL CKARGWLTFS AAAADRGGSG GDAMMYRRQG
201: STASEVV
Best Arabidopsis Sequence Match ( AT3G13620.1 )
(BLAST)
001: MAISEASKSS HELPVTTAES SGKKATAKKL TLIPLVFLIY FEVAGGPFGE EPAVQAAGPL LAILGFLIFP FIWSIPEALI TAELSTAFPG NGGFVIWAHR
101: AFGSFVGSMM GSLKFLSGVI NVASFPVLCV TYLDKLFPVL ESGWPRNVCI FASTVVLSFL NYTGLAIVGY AAVVLGLVSL SPFLVMSAMA IPKIKPHRWG
201: SLGTKKKDWN LYFNTLFWNL NFWDNVSTLA GEVDEPQKTF PLALLIAVIF TCVAYLIPLF AVTGAVSVDQ SRWENGFHAE AAEMIAGKWL KIWIEIGAVL
301: SSIGLFEAQL SSSAYQLEGM AELGFLPKFF GVRSKWFNTP WVGILISALM SLGLSYMNFT DIISSANFLY TLGMFLEFAS FIWLRRKLPQ LKRPYRVPLK
401: IPGLVVMCLI PSAFLVLILV FATKIVYLIC GVMTIGAIGW YFLINYFRKT KIFEFNEVID DLDNNVNGEH PKVDDHNS
Arabidopsis Description
PUT4 [Source:UniProtKB/TrEMBL;Acc:A0A178VLM5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.