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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400082048 Potato plasma membrane 96.0 96.41
Solyc01g034080.1.1 Tomato plasma membrane 76.21 77.02
KRH72395 Soybean plasma membrane 71.16 71.91
KRH16786 Soybean plasma membrane 71.58 70.69
VIT_06s0004g00800.t01 Wine grape plasma membrane 71.16 69.98
CDX82530 Canola plasma membrane 69.26 68.97
Bra001514.1-P Field mustard plasma membrane 69.26 68.97
CDY23626 Canola plasma membrane 68.63 68.63
CDX75721 Canola plasma membrane 68.84 68.55
CDX97502 Canola plasma membrane 68.63 68.34
Bra027411.1-P Field mustard plasma membrane 68.63 68.34
AT3G13620.1 Thale cress plasma membrane 68.42 67.99
CDX75722 Canola plasma membrane 38.11 67.04
KRH45451 Soybean plasma membrane 28.42 62.21
TraesCS7A01G464900.1 Wheat golgi, plasma membrane, vacuole 56.63 55.93
TraesCS7B01G365600.1 Wheat golgi, plasma membrane, vacuole 56.63 55.58
TraesCS7D01G452600.1 Wheat golgi, plasma membrane, vacuole 56.42 54.58
TraesCS5B01G533500.1 Wheat plasma membrane 56.42 54.58
Zm00001d029321_P001 Maize plasma membrane 54.95 53.7
EER92207 Sorghum endoplasmic reticulum, plasma membrane, vacuole 28.42 53.57
HORVU7Hr1G106710.2 Barley cytosol, plasma membrane 56.84 52.53
Os03t0375966-00 Rice cytosol, golgi, peroxisome 34.32 52.24
TraesCS5D01G531700.1 Wheat mitochondrion, plasma membrane 56.21 51.15
Zm00001d029318_P001 Maize plasma membrane 32.42 50.99
TraesCSU01G047000.1 Wheat plasma membrane 32.42 50.83
TraesCSU01G202300.1 Wheat plasma membrane 32.42 50.83
EER92206 Sorghum plasma membrane 53.05 50.81
TraesCS5B01G316000.1 Wheat golgi, peroxisome, plasma membrane 52.84 50.4
TraesCS5D01G321300.1 Wheat golgi, peroxisome, plasma membrane 52.63 50.2
TraesCS4B01G350000.1 Wheat golgi, peroxisome, plasma membrane 52.84 50.2
TraesCS5A01G315000.1 Wheat golgi, peroxisome, plasma membrane 52.42 50.0
TraesCS3A01G030900.1 Wheat peroxisome, plasma membrane, vacuole 50.53 49.9
Zm00001d029320_P001 Maize plasma membrane 32.21 49.2
TraesCS4D01G344800.1 Wheat plasma membrane 52.42 49.11
HORVU4Hr1G085290.4 Barley golgi, peroxisome, plasma membrane 52.21 48.92
Zm00001d029314_P001 Maize plasma membrane 49.05 48.54
GSMUA_AchrUn_... Banana cytosol, peroxisome, plasma membrane 47.37 48.49
TraesCSU01G046900.1 Wheat plasma membrane 15.16 48.32
Os03t0374900-00 Rice peroxisome, plasma membrane, vacuole 33.26 47.88
KXG39283 Sorghum plasma membrane 52.21 47.6
Os03t0375900-01 Rice plasma membrane 20.63 47.34
TraesCS3B01G031700.1 Wheat plasma membrane 50.32 47.23
OQU92528 Sorghum plasma membrane 48.84 46.96
HORVU3Hr1G005010.3 Barley vacuole 22.95 45.23
Zm00001d029319_P001 Maize endoplasmic reticulum, plasma membrane, plastid, vacuole 13.68 44.22
Solyc08g078100.1.1 Tomato plasma membrane 42.74 43.38
TraesCS5D01G321500.1 Wheat golgi, mitochondrion, plasma membrane, plastid, vacuole 16.84 41.67
Solyc10g049640.1.1 Tomato plasma membrane 42.95 41.63
Solyc01g111800.2.1 Tomato plasma membrane 40.0 41.21
TraesCS5D01G321700.1 Wheat plasma membrane 16.63 41.15
Solyc08g005540.1.1 Tomato cytosol, peroxisome, plasma membrane 45.05 40.38
Solyc09g092420.1.1 Tomato plasma membrane 24.0 40.0
Solyc08g075710.2.1 Tomato plastid 43.16 38.39
TraesCS5A01G315600.1 Wheat extracellular, plasma membrane, vacuole 12.21 38.16
HORVU3Hr1G005120.1 Barley cytosol 16.42 37.68
Os03t0375300-02 Rice nucleus 36.84 31.99
Protein Annotations
Gene3D:1.20.1740.10MapMan:24.2.3.5.1InterPro:AA/rel_permease1GO:GO:0003333GO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0005887GO:GO:0006810GO:GO:0008150
GO:GO:0015171GO:GO:0015203GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0022857
GO:GO:0055085GO:GO:1902047UniProt:K4ASF8PFAM:PF13520PIRSF:PIRSF006060PANTHER:PTHR11785
PANTHER:PTHR11785:SF378EnsemblPlantsGene:Solyc01g005920.2EnsemblPlants:Solyc01g005920.2.1TMHMM:TMhelixUniParc:UPI0002761EB7SEG:seg
Description
No Description!
Coordinates
chr1:-:600898..602616
Molecular Weight (calculated)
52974.9 Da
IEP (calculated)
8.178
GRAVY (calculated)
0.589
Length
475 amino acids
Sequence
(BLAST)
001: MTQMIETQNL ESPLSTIEPP QHLPTTTNPT TPQKNHKLTL IPLIFLIYFE VAGGPYGEEP AVKAAGPLLA ILGFLVFPFI WSVPEALITA ELSTTFPGNG
101: GFVIWADKAF GPFWGSLMGS WKFLTGVINI ASFPVLCISY LEEIFPVLDS GVPRKLAILG STLFLSLVNY TGLTIVGYVA VALGVISLAP FIIMSLIAIP
201: KIHPHRWLSL GQKGVKKDWN LFFNTLFWNL NFWDNVSTMA GEVENPRKTF PLALFSSVVF TCLGYIIPLM AVTGAVDVDQ RDWDTGFMAN AAEMISGKWL
301: KFWIEIGAVL STIGLFEAQL SSSAFQILGM AEIAFLPKFF GLRSKWFNTP WVGIVLSTTI SLGMSYMDFQ DIISSANFLY SLGMLLEFAS FLWLRRKFPL
401: IKRPYRVPMR LPLLVIMCLI PCGFLVFIMA IATKLVYLIS GLMTIGGIGW YFLMNFCKSK KLLKFNDKVD DTYIE
Best Arabidopsis Sequence Match ( AT3G13620.1 )
(BLAST)
001: MAISEASKSS HELPVTTAES SGKKATAKKL TLIPLVFLIY FEVAGGPFGE EPAVQAAGPL LAILGFLIFP FIWSIPEALI TAELSTAFPG NGGFVIWAHR
101: AFGSFVGSMM GSLKFLSGVI NVASFPVLCV TYLDKLFPVL ESGWPRNVCI FASTVVLSFL NYTGLAIVGY AAVVLGLVSL SPFLVMSAMA IPKIKPHRWG
201: SLGTKKKDWN LYFNTLFWNL NFWDNVSTLA GEVDEPQKTF PLALLIAVIF TCVAYLIPLF AVTGAVSVDQ SRWENGFHAE AAEMIAGKWL KIWIEIGAVL
301: SSIGLFEAQL SSSAYQLEGM AELGFLPKFF GVRSKWFNTP WVGILISALM SLGLSYMNFT DIISSANFLY TLGMFLEFAS FIWLRRKLPQ LKRPYRVPLK
401: IPGLVVMCLI PSAFLVLILV FATKIVYLIC GVMTIGAIGW YFLINYFRKT KIFEFNEVID DLDNNVNGEH PKVDDHNS
Arabidopsis Description
PUT4 [Source:UniProtKB/TrEMBL;Acc:A0A178VLM5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.