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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, peroxisome, vacuole

Predictor Summary:
  • vacuole 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G031700.1 Wheat plasma membrane 93.76 89.13
TraesCSU01G202300.1 Wheat plasma membrane 51.14 81.19
TraesCSU01G047000.1 Wheat plasma membrane 51.14 81.19
TraesCS5A01G315000.1 Wheat golgi, peroxisome, plasma membrane 79.63 76.91
HORVU3Hr1G005010.3 Barley vacuole 36.59 73.03
KXG39283 Sorghum plasma membrane 75.05 69.29
Zm00001d029314_P001 Maize plasma membrane 68.61 68.75
Zm00001d029318_P001 Maize plasma membrane 43.04 68.54
Os03t0374900-00 Rice peroxisome, plasma membrane, vacuole 46.78 68.18
OQU92528 Sorghum plasma membrane 69.02 67.21
TraesCS5A01G315600.1 Wheat extracellular, plasma membrane, vacuole 18.71 59.21
TraesCS7A01G464900.1 Wheat golgi, plasma membrane, vacuole 54.89 54.89
PGSC0003DMT400082048 Potato plasma membrane 50.31 51.16
VIT_06s0004g00790.t01 Wine grape plasma membrane 50.31 50.95
KRH72395 Soybean plasma membrane 49.48 50.64
Solyc01g005920.2.1 Tomato plasma membrane 49.9 50.53
KRH16786 Soybean plasma membrane 50.1 50.1
VIT_06s0004g00800.t01 Wine grape plasma membrane 50.31 50.1
Solyc01g034080.1.1 Tomato plasma membrane 48.02 49.15
PGSC0003DMT400028298 Potato mitochondrion, plasma membrane 47.82 48.94
KRH58913 Soybean plasma membrane 48.65 48.55
KRH42817 Soybean plasma membrane 48.02 47.83
PGSC0003DMT400082047 Potato plasma membrane 46.99 47.28
Bra001514.1-P Field mustard plasma membrane 46.78 47.17
CDX75722 Canola plasma membrane 26.4 47.04
CDX82530 Canola plasma membrane 46.57 46.96
CDX75721 Canola plasma membrane 46.57 46.96
CDX97502 Canola plasma membrane 46.15 46.54
Bra027411.1-P Field mustard plasma membrane 46.15 46.54
CDY23626 Canola plasma membrane 45.95 46.53
AT3G13620.1 Thale cress plasma membrane 45.95 46.23
GSMUA_AchrUn_... Banana cytosol, peroxisome, plasma membrane 44.49 46.12
Os03t0375300-02 Rice nucleus 52.18 45.89
KRH45451 Soybean plasma membrane 19.96 44.24
TraesCS5A01G073000.1 Wheat golgi, plasma membrane, vacuole 37.63 37.32
TraesCS5A01G022700.1 Wheat mitochondrion, plasma membrane 37.84 36.77
TraesCS6A01G269200.2 Wheat plasma membrane 40.33 36.74
Protein Annotations
EnsemblPlants:TraesCS3A01G030900.1EnsemblPlantsGene:TraesCS3A01G030900Gene3D:1.20.1740.10GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0022857GO:GO:0055085InterPro:AA/rel_permease1
PANTHER:PTHR11785PANTHER:PTHR11785:SF378PFAM:PF13520PIRSF:PIRSF006060SEG:segTMHMM:TMhelix
MapMan:24.2.3.5.1:::::
Description
No Description!
Coordinates
chr3A:+:16858103..16860844
Molecular Weight (calculated)
51445.0 Da
IEP (calculated)
9.522
GRAVY (calculated)
0.461
Length
481 amino acids
Sequence
(BLAST)
001: MNQEILMTKQ SSPTQSQEEQ EHPQLHATVA QQGGGSTPSE SNHQRRITMI PLVFLIYFEV ADGPYGSEQA VRAAGPLFTL LGFLVFPLAC GVPESLVTAE
101: LTAAFPGNGG FVLWADHAFG PLAGSLLGTW RYLSIVINIA AYPALVADYL GGVVPAVARP GRAHMGTVVG MTLLLSLLNY AGLSVVGWGA TALGIASLAP
201: FVLMTAMAVP KVRPRRWAKQ VKGRKKDWRL FFNTLFWNLN YWDSASTMAG EVERPERTFP RALAAAVVLI AASYLLPLMA ATGATDASPD AWVNGYLATA
301: AGIIGGPWLK YWTGAGAVIS SIGMFEAQMS SGAFQLHGMA DRGLLPSVFG SRAARTGTPW VAITASTAIT IAVSFLGFDN IVATSNFLYS LGTLLEFSSI
401: LWLRVKYPTL KRPYHVPLPL PALIAMCIVP SVFLSYVCVV AGWRVFTIAA GLTALGVGWH GLMKLCISKK LLSFRVPESS C
Best Arabidopsis Sequence Match ( AT1G31830.1 )
(BLAST)
001: MQKRRIITVN PSASIEMSQY ENNEVPYSSV GADEVPSSPP KATDKIRKVS MLPLVFLIFY EVSGGPFGVE DSVNAAGPLL ALLGFVIFPF IWSIPEALIT
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR
Arabidopsis Description
Probable polyamine transporter At1g31830 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S5]
SUBAcon: [golgi,plasma membrane,mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.