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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 6
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCSU01G046900.1 Wheat plasma membrane 34.44 69.8
TraesCS5D01G321700.1 Wheat plasma membrane 37.42 58.85
TraesCS5A01G315600.1 Wheat extracellular, plasma membrane, vacuole 29.47 58.55
TraesCS5D01G321500.1 Wheat golgi, mitochondrion, plasma membrane, plastid, vacuole 36.76 57.81
HORVU3Hr1G005010.3 Barley vacuole 41.39 51.87
Zm00001d029314_P001 Maize plasma membrane 81.13 51.04
Zm00001d029319_P001 Maize endoplasmic reticulum, plasma membrane, plastid, vacuole 24.83 51.02
KXG39283 Sorghum plasma membrane 87.09 50.48
TraesCS5D01G321300.1 Wheat golgi, peroxisome, plasma membrane 77.15 46.79
TraesCS5B01G316000.1 Wheat golgi, peroxisome, plasma membrane 76.16 46.18
TraesCS5A01G315000.1 Wheat golgi, peroxisome, plasma membrane 75.5 45.78
TraesCS4D01G344800.1 Wheat plasma membrane 74.83 44.58
TraesCS4B01G350000.1 Wheat golgi, peroxisome, plasma membrane 73.51 44.4
HORVU4Hr1G085290.4 Barley golgi, peroxisome, plasma membrane 74.5 44.38
KRH45451 Soybean plasma membrane 31.13 43.32
TraesCS3A01G030900.1 Wheat peroxisome, plasma membrane, vacuole 68.54 43.04
TraesCS3B01G031700.1 Wheat plasma membrane 67.88 40.51
Zm00001d029321_P001 Maize plasma membrane 59.6 37.04
VIT_06s0004g00790.t01 Wine grape plasma membrane 51.66 32.84
PGSC0003DMT400082048 Potato plasma membrane 51.32 32.77
PGSC0003DMT400082047 Potato plasma membrane 51.32 32.43
Solyc01g005920.2.1 Tomato plasma membrane 50.99 32.42
KRH72395 Soybean plasma membrane 50.33 32.34
VIT_06s0004g00800.t01 Wine grape plasma membrane 51.66 32.3
KRH42817 Soybean plasma membrane 51.66 32.3
CDX82530 Canola plasma membrane 50.33 31.87
CDY23626 Canola plasma membrane 50.0 31.79
PGSC0003DMT400028298 Potato mitochondrion, plasma membrane 49.34 31.7
Solyc01g034080.1.1 Tomato plasma membrane 49.34 31.7
Bra001514.1-P Field mustard plasma membrane 50.0 31.66
KRH58913 Soybean plasma membrane 50.33 31.54
Bra027411.1-P Field mustard plasma membrane 49.67 31.45
CDX75721 Canola plasma membrane 49.67 31.45
CDX97502 Canola plasma membrane 49.67 31.45
KRH16786 Soybean plasma membrane 49.34 30.98
AT3G13620.1 Thale cress plasma membrane 48.34 30.54
GSMUA_AchrUn_... Banana cytosol, peroxisome, plasma membrane 46.03 29.96
Os03t0374900-00 Rice peroxisome, plasma membrane, vacuole 31.13 28.48
TraesCSU01G202300.1 Wheat plasma membrane 28.15 28.05
TraesCSU01G047000.1 Wheat plasma membrane 28.15 28.05
Zm00001d030832_P001 Maize plasma membrane 42.72 25.96
Zm00001d024516_P001 Maize plasma membrane 40.73 24.95
Zm00001d017728_P001 Maize plasma membrane 42.38 24.38
Os03t0375300-02 Rice nucleus 42.72 23.58
Zm00001d029320_P001 Maize plasma membrane 24.17 23.47
CDX75722 Canola plasma membrane 18.87 21.11
HORVU3Hr1G005120.1 Barley cytosol 0.66 0.97
Protein Annotations
Gene3D:1.20.1740.10MapMan:24.2.3.5.1UniProt:A0A1D6K479InterPro:AA/rel_permease1GO:GO:0003333GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015171GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085ProteinID:ONL98430.1PFAM:PF13520PANTHER:PTHR11785
PANTHER:PTHR11785:SF378TMHMM:TMhelixUniParc:UPI000843BCB0EnsemblPlantsGene:Zm00001d029318EnsemblPlants:Zm00001d029318_P001EnsemblPlants:Zm00001d029318_T001
SEG:seg:::::
Description
Probable polyamine transporter
Coordinates
chr1:-:65782144..65786175
Molecular Weight (calculated)
32809.2 Da
IEP (calculated)
10.180
GRAVY (calculated)
0.528
Length
302 amino acids
Sequence
(BLAST)
001: MTVFLSFVNY TGLSIVGWGA VALGLVSLAP FVLMTGIAVP KMRPRRWTVP VEGRKDWRLF FNTLFWNLNY WDSASTMAGE VERPEPTGAT DAPPDTWANG
101: YLVDAAGVIG GPWLKFWIEA GVVLSSIGMF EAQLSSGAFQ LLGMADLGLL PAVFARRAAR FRTPWVAVAA SSAVTLAVSF LAFDDVVATA NFLYSLGTLL
201: EFAAFLWLRV RQPYLKRPYR VPLSLPALAA MCAVPSTFLA YVCVVAGWRV FALAGALTVF GVGLHGTMRL CRAKRWLRFK TGLVAAAEDR RGDVAVSAGD
301: RV
Best Arabidopsis Sequence Match ( AT1G31830.1 )
(BLAST)
001: MQKRRIITVN PSASIEMSQY ENNEVPYSSV GADEVPSSPP KATDKIRKVS MLPLVFLIFY EVSGGPFGVE DSVNAAGPLL ALLGFVIFPF IWSIPEALIT
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR
Arabidopsis Description
Probable polyamine transporter At1g31830 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S5]
SUBAcon: [mitochondrion,plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.