Factsheet for Zm00001d029319_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, vacuole, plasma membrane

Predictor Summary:

plastid 1
mitochondrion 1
endoplasmic reticulum 2
extracellular 1
vacuole 2
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, plastid, vacuole
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45451	Soybean	plasma membrane	42.86	29.03
Zm00001d029318_P001	Maize	plasma membrane	51.02	24.83
Zm00001d029321_P001	Maize	plasma membrane	68.03	20.58
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	53.74	17.03
Zm00001d029314_P001	Maize	plasma membrane	52.38	16.04
KRH58913	Soybean	plasma membrane	51.02	15.56
KRH42817	Soybean	plasma membrane	49.66	15.11
VIT_06s0004g00790.t01	Wine grape	plasma membrane	48.3	14.95
VIT_06s0004g00800.t01	Wine grape	plasma membrane	46.94	14.29
PGSC0003DMT400028298	Potato	mitochondrion, plasma membrane	44.9	14.04
PGSC0003DMT400082047	Potato	plasma membrane	44.9	13.81
Solyc01g005920.2.1	Tomato	plasma membrane	44.22	13.68
PGSC0003DMT400082048	Potato	plasma membrane	43.54	13.53
KRH72395	Soybean	plasma membrane	42.86	13.4
KRH16786	Soybean	plasma membrane	43.54	13.31
CDX97502	Canola	plasma membrane	42.86	13.21
Bra027411.1-P	Field mustard	plasma membrane	42.86	13.21
Solyc01g034080.1.1	Tomato	plasma membrane	42.18	13.19
CDY23626	Canola	plasma membrane	42.18	13.05
Zm00001d017728_P001	Maize	plasma membrane	46.26	12.95
Zm00001d030832_P001	Maize	plasma membrane	42.18	12.47
CDX82530	Canola	plasma membrane	40.14	12.37
CDX75721	Canola	plasma membrane	40.14	12.37
Bra001514.1-P	Field mustard	plasma membrane	40.14	12.37
AT3G13620.1	Thale cress	plasma membrane	39.46	12.13
Zm00001d024516_P001	Maize	plasma membrane	35.37	10.55
EER92207	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	2.04	1.19
CDX75722	Canola	plasma membrane	1.36	0.74
Zm00001d029320_P001	Maize	plasma membrane	1.36	0.64

Protein Annotations

Gene3D:1.20.1740.10	MapMan:24.2.3.5.1	UniProt:A0A1D6K480	InterPro:AA/rel_permease1	GO:GO:0003333	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	ProteinID:ONL98431.1	PFAM:PF13520	PANTHER:PTHR11785
PANTHER:PTHR11785:SF378	TMHMM:TMhelix	UniParc:UPI0008454344	EnsemblPlantsGene:Zm00001d029319	EnsemblPlants:Zm00001d029319_P001	EnsemblPlants:Zm00001d029319_T001

Description

Probable polyamine transporter

Coordinates

chr1:-:65850139..65850589

Molecular Weight (calculated)

15571.3 Da

IEP (calculated)

8.481

GRAVY (calculated)

0.820

Length

147 amino acids

Sequence
(BLAST)

001: MADLGHLPSL FAARAPAFGT PWASISVTGA IALGMSFLSF DSIVAVTNFL YSLGMLLEFA AFVWLRARRP DLPRPYRVPL GTAGVVAMCA VPSSFLVLVM
101: AVAGWKVCVA SAAFTAAGVV VYYVMAFCKD RGCLKFGARA EGEYEGC

Best Arabidopsis Sequence Match ( AT3G13620.1 )
(BLAST)

001: MAISEASKSS HELPVTTAES SGKKATAKKL TLIPLVFLIY FEVAGGPFGE EPAVQAAGPL LAILGFLIFP FIWSIPEALI TAELSTAFPG NGGFVIWAHR
101: AFGSFVGSMM GSLKFLSGVI NVASFPVLCV TYLDKLFPVL ESGWPRNVCI FASTVVLSFL NYTGLAIVGY AAVVLGLVSL SPFLVMSAMA IPKIKPHRWG
201: SLGTKKKDWN LYFNTLFWNL NFWDNVSTLA GEVDEPQKTF PLALLIAVIF TCVAYLIPLF AVTGAVSVDQ SRWENGFHAE AAEMIAGKWL KIWIEIGAVL
301: SSIGLFEAQL SSSAYQLEGM AELGFLPKFF GVRSKWFNTP WVGILISALM SLGLSYMNFT DIISSANFLY TLGMFLEFAS FIWLRRKLPQ LKRPYRVPLK
401: IPGLVVMCLI PSAFLVLILV FATKIVYLIC GVMTIGAIGW YFLINYFRKT KIFEFNEVID DLDNNVNGEH PKVDDHNS

Arabidopsis Description

PUT4 [Source:UniProtKB/TrEMBL;Acc:A0A178VLM5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.