Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027411.1-P | Field mustard | plasma membrane | 98.53 | 98.11 |
| CDX97502 | Canola | plasma membrane | 98.32 | 97.9 |
| CDX75721 | Canola | plasma membrane | 91.79 | 91.4 |
| CDX82530 | Canola | plasma membrane | 91.37 | 90.99 |
| AT3G13620.1 | Thale cress | plasma membrane | 90.11 | 89.54 |
| CDX75722 | Canola | plasma membrane | 50.74 | 89.26 |
| KRH72395 | Soybean | plasma membrane | 70.53 | 71.28 |
| PGSC0003DMT400028298 | Potato | mitochondrion, plasma membrane | 68.63 | 69.36 |
| Solyc01g005920.2.1 | Tomato | plasma membrane | 68.63 | 68.63 |
| Solyc01g034080.1.1 | Tomato | plasma membrane | 67.79 | 68.51 |
| PGSC0003DMT400082048 | Potato | plasma membrane | 68.0 | 68.29 |
| KRH16786 | Soybean | plasma membrane | 69.05 | 68.19 |
| VIT_06s0004g00800.t01 | Wine grape | plasma membrane | 68.21 | 67.08 |
| KRH45451 | Soybean | plasma membrane | 27.58 | 60.37 |
| TraesCS7A01G464900.1 | Wheat | golgi, plasma membrane, vacuole | 54.11 | 53.43 |
| TraesCS7B01G365600.1 | Wheat | golgi, plasma membrane, vacuole | 53.68 | 52.69 |
| TraesCS7D01G452600.1 | Wheat | golgi, plasma membrane, vacuole | 54.32 | 52.55 |
| Zm00001d029321_P001 | Maize | plasma membrane | 53.68 | 52.47 |
| EER92207 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 27.58 | 51.98 |
| TraesCS5B01G533500.1 | Wheat | plasma membrane | 53.68 | 51.93 |
| EER92206 | Sorghum | plasma membrane | 53.68 | 51.41 |
| Os03t0375966-00 | Rice | cytosol, golgi, peroxisome | 33.47 | 50.96 |
| HORVU7Hr1G106710.2 | Barley | cytosol, plasma membrane | 54.32 | 50.19 |
| Zm00001d029318_P001 | Maize | plasma membrane | 31.79 | 50.0 |
| TraesCS5D01G531700.1 | Wheat | mitochondrion, plasma membrane | 53.68 | 48.85 |
| TraesCSU01G202300.1 | Wheat | plasma membrane | 31.16 | 48.84 |
| TraesCSU01G047000.1 | Wheat | plasma membrane | 31.16 | 48.84 |
| TraesCS5D01G321300.1 | Wheat | golgi, peroxisome, plasma membrane | 49.89 | 47.59 |
| TraesCS5A01G315000.1 | Wheat | golgi, peroxisome, plasma membrane | 49.89 | 47.59 |
| TraesCS5B01G316000.1 | Wheat | golgi, peroxisome, plasma membrane | 49.89 | 47.59 |
| OQU92528 | Sorghum | plasma membrane | 48.84 | 46.96 |
| Zm00001d029320_P001 | Maize | plasma membrane | 30.74 | 46.95 |
| CDY63076 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 37.05 | 46.93 |
| CDY42190 | Canola | golgi, plasma membrane, vacuole | 47.16 | 46.86 |
| Os03t0374900-00 | Rice | peroxisome, plasma membrane, vacuole | 32.42 | 46.67 |
| TraesCS4B01G350000.1 | Wheat | golgi, peroxisome, plasma membrane | 49.05 | 46.6 |
| Zm00001d029314_P001 | Maize | plasma membrane | 46.95 | 46.46 |
| TraesCSU01G046900.1 | Wheat | plasma membrane | 14.53 | 46.31 |
| CDY69762 | Canola | golgi, plasma membrane, vacuole | 46.53 | 46.23 |
| TraesCS4D01G344800.1 | Wheat | plasma membrane | 49.26 | 46.15 |
| HORVU4Hr1G085290.4 | Barley | golgi, peroxisome, plasma membrane | 49.05 | 45.96 |
| TraesCS3A01G030900.1 | Wheat | peroxisome, plasma membrane, vacuole | 46.53 | 45.95 |
| Os03t0375900-01 | Rice | plasma membrane | 20.0 | 45.89 |
| CDY46166 | Canola | plasma membrane | 46.11 | 45.72 |
| CDX99215 | Canola | plasma membrane | 46.11 | 45.44 |
| KXG39283 | Sorghum | plasma membrane | 49.68 | 45.3 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plasma membrane | 44.21 | 45.26 |
| CDY12286 | Canola | plasma membrane | 36.0 | 43.73 |
| TraesCS3B01G031700.1 | Wheat | plasma membrane | 46.53 | 43.68 |
| HORVU3Hr1G005010.3 | Barley | vacuole | 22.11 | 43.57 |
| CDX98852 | Canola | plasma membrane, plastid | 43.58 | 42.33 |
| Zm00001d029319_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid, vacuole | 13.05 | 42.18 |
| CDX70141 | Canola | plasma membrane, plastid | 42.53 | 41.48 |
| CDY12285 | Canola | golgi, peroxisome, plasma membrane, plastid | 43.37 | 41.37 |
| TraesCS5D01G321500.1 | Wheat | golgi, mitochondrion, plasma membrane, plastid, vacuole | 16.0 | 39.58 |
| TraesCS5D01G321700.1 | Wheat | plasma membrane | 15.79 | 39.06 |
| HORVU3Hr1G005120.1 | Barley | cytosol | 16.63 | 38.16 |
| TraesCS5A01G315600.1 | Wheat | extracellular, plasma membrane, vacuole | 12.0 | 37.5 |
| Os03t0375300-02 | Rice | nucleus | 36.63 | 31.81 |
Protein Annotations
| Gene3D:1.20.1740.10 | MapMan:24.2.3.5.1 | GO:A0A078GE45 | UniProt:A0A078GE45 | InterPro:AA/rel_permease1 | EnsemblPlants:CDY23626 |
| ProteinID:CDY23626 | ProteinID:CDY23626.1 | GO:GO:0003333 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015171 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 |
| GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00023849001 | PFAM:PF13520 | PIRSF:PIRSF006060 | PANTHER:PTHR11785 | PANTHER:PTHR11785:SF378 |
| TMHMM:TMhelix | UniParc:UPI0004EB8AAC | SEG:seg | : | : | : |
Description
BnaC05g39680DBnaC05g39680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GE45]
Coordinates
chrLK032145:-:500847..502584
Molecular Weight (calculated)
52402.5 Da
IEP (calculated)
7.112
GRAVY (calculated)
0.591
Length
475 amino acids
Sequence
(BLAST)
(BLAST)
001: MAITETSRSS HELPVTTTTA STAKKLTLVP LIFLIYFEVA GGPFGEEPAV QAAGPLLAIL GFLIFPFIWS VPEALITAEL STAFPGNGGF VIWAHRAFGA
101: FVGSMMGSLK FLSGVINVAS FPVLCVTYLD KLFPVLESGW PRNVCIFAST VVLSFLNYTG LAIVGYAAVV LGLVSLSPFL VMSAMAIPKI KPHRWGSLGS
201: KKKDWNLYFN TLFWNLNFWD NVSTLAGEVD NPQKTFPLAL LIAVIFTCVA YLIPLFAVTG AVSVDQSRWE TGFHAEAAEM IAGKWLKIWI EVGAVLSSIG
301: LFEAQLSSSA YQLEGMAELG FLPKFFGLRS KWFNTPWVGI LLSALMSLGL SYMDFTDIVA SANFIYTLGM FLEFASFVWL RKKLPELKRP YRVPLNIPGL
401: VVMCLVPSAF LVLIIVFATK IVYLVSGLMT VGAVGWYFLI NYFREKKIFE FNEDTDLLDK GNGDRTKVED HHDSR
101: FVGSMMGSLK FLSGVINVAS FPVLCVTYLD KLFPVLESGW PRNVCIFAST VVLSFLNYTG LAIVGYAAVV LGLVSLSPFL VMSAMAIPKI KPHRWGSLGS
201: KKKDWNLYFN TLFWNLNFWD NVSTLAGEVD NPQKTFPLAL LIAVIFTCVA YLIPLFAVTG AVSVDQSRWE TGFHAEAAEM IAGKWLKIWI EVGAVLSSIG
301: LFEAQLSSSA YQLEGMAELG FLPKFFGLRS KWFNTPWVGI LLSALMSLGL SYMDFTDIVA SANFIYTLGM FLEFASFVWL RKKLPELKRP YRVPLNIPGL
401: VVMCLVPSAF LVLIIVFATK IVYLVSGLMT VGAVGWYFLI NYFREKKIFE FNEDTDLLDK GNGDRTKVED HHDSR
001: MAISEASKSS HELPVTTAES SGKKATAKKL TLIPLVFLIY FEVAGGPFGE EPAVQAAGPL LAILGFLIFP FIWSIPEALI TAELSTAFPG NGGFVIWAHR
101: AFGSFVGSMM GSLKFLSGVI NVASFPVLCV TYLDKLFPVL ESGWPRNVCI FASTVVLSFL NYTGLAIVGY AAVVLGLVSL SPFLVMSAMA IPKIKPHRWG
201: SLGTKKKDWN LYFNTLFWNL NFWDNVSTLA GEVDEPQKTF PLALLIAVIF TCVAYLIPLF AVTGAVSVDQ SRWENGFHAE AAEMIAGKWL KIWIEIGAVL
301: SSIGLFEAQL SSSAYQLEGM AELGFLPKFF GVRSKWFNTP WVGILISALM SLGLSYMNFT DIISSANFLY TLGMFLEFAS FIWLRRKLPQ LKRPYRVPLK
401: IPGLVVMCLI PSAFLVLILV FATKIVYLIC GVMTIGAIGW YFLINYFRKT KIFEFNEVID DLDNNVNGEH PKVDDHNS
101: AFGSFVGSMM GSLKFLSGVI NVASFPVLCV TYLDKLFPVL ESGWPRNVCI FASTVVLSFL NYTGLAIVGY AAVVLGLVSL SPFLVMSAMA IPKIKPHRWG
201: SLGTKKKDWN LYFNTLFWNL NFWDNVSTLA GEVDEPQKTF PLALLIAVIF TCVAYLIPLF AVTGAVSVDQ SRWENGFHAE AAEMIAGKWL KIWIEIGAVL
301: SSIGLFEAQL SSSAYQLEGM AELGFLPKFF GVRSKWFNTP WVGILISALM SLGLSYMNFT DIISSANFLY TLGMFLEFAS FIWLRRKLPQ LKRPYRVPLK
401: IPGLVVMCLI PSAFLVLILV FATKIVYLIC GVMTIGAIGW YFLINYFRKT KIFEFNEVID DLDNNVNGEH PKVDDHNS
Arabidopsis Description
PUT4 [Source:UniProtKB/TrEMBL;Acc:A0A178VLM5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.