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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:
  • golgi 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome, plasma membrane
Any Predictor:golgi, peroxisome, plasma membrane
MultiLoc:golgi
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G316000.1 Wheat golgi, peroxisome, plasma membrane 97.99 97.99
TraesCS5A01G315000.1 Wheat golgi, peroxisome, plasma membrane 95.78 95.78
TraesCS4D01G344800.1 Wheat plasma membrane 82.53 81.07
Zm00001d029318_P001 Maize plasma membrane 46.79 77.15
KXG39283 Sorghum plasma membrane 80.52 76.97
Os03t0374900-00 Rice peroxisome, plasma membrane, vacuole 49.2 74.24
Zm00001d029314_P001 Maize plasma membrane 70.48 73.12
TraesCS5D01G321700.1 Wheat plasma membrane 28.11 72.92
TraesCS5D01G321500.1 Wheat golgi, mitochondrion, plasma membrane, plastid, vacuole 27.71 71.88
OQU92528 Sorghum plasma membrane 71.08 71.66
HORVU3Hr1G005120.1 Barley cytosol 25.7 61.84
TraesCS7D01G452600.1 Wheat golgi, plasma membrane, vacuole 56.02 56.82
VIT_06s0004g00790.t01 Wine grape plasma membrane 51.2 53.68
PGSC0003DMT400082048 Potato plasma membrane 50.8 53.49
KRH72395 Soybean plasma membrane 50.2 53.19
Solyc01g005920.2.1 Tomato plasma membrane 50.2 52.63
TraesCS5D01G531700.1 Wheat mitochondrion, plasma membrane 54.62 52.11
KRH16786 Soybean plasma membrane 50.0 51.77
Solyc01g034080.1.1 Tomato plasma membrane 48.39 51.28
PGSC0003DMT400028298 Potato mitochondrion, plasma membrane 48.39 51.28
CDX75722 Canola plasma membrane 27.51 50.74
Bra001514.1-P Field mustard plasma membrane 48.39 50.52
CDX75721 Canola plasma membrane 48.39 50.52
VIT_06s0004g00800.t01 Wine grape plasma membrane 49.0 50.52
CDX82530 Canola plasma membrane 48.19 50.31
KRH42817 Soybean plasma membrane 48.8 50.31
PGSC0003DMT400082047 Potato plasma membrane 48.19 50.21
KRH58913 Soybean plasma membrane 48.59 50.21
Os03t0375300-02 Rice nucleus 55.02 50.09
CDY23626 Canola plasma membrane 47.59 49.89
CDX97502 Canola plasma membrane 47.39 49.48
Bra027411.1-P Field mustard plasma membrane 47.39 49.48
AT3G13620.1 Thale cress plasma membrane 47.39 49.37
GSMUA_AchrUn_... Banana cytosol, peroxisome, plasma membrane 45.18 48.49
KRH45451 Soybean plasma membrane 18.88 43.32
TraesCS6D01G245700.1 Wheat plasma membrane 40.76 40.76
TraesCS5D01G085800.1 Wheat golgi, plasma membrane, vacuole 39.16 40.29
TraesCS5D01G028100.1 Wheat plasma membrane 39.36 39.6
Protein Annotations
EnsemblPlants:TraesCS5D01G321300.1EnsemblPlantsGene:TraesCS5D01G321300Gene3D:1.20.1740.10GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0022857GO:GO:0055085InterPro:AA/rel_permease1
PANTHER:PTHR11785PANTHER:PTHR11785:SF378PFAM:PF13520PIRSF:PIRSF006060SEG:segTMHMM:TMhelix
MapMan:24.2.3.5.1:::::
Description
No Description!
Coordinates
chr5D:+:413283786..413287056
Molecular Weight (calculated)
53289.7 Da
IEP (calculated)
8.966
GRAVY (calculated)
0.403
Length
498 amino acids
Sequence
(BLAST)
001: MNQEILTDRQ PSQSEEQGQH PQPHGAVAQE HAPHDQQLQQ GGGRTPASSG HLRRKITLIP LVFLIYFEVA GGPYGSEKAV RAAGPLFTLL GFLVFPFAWG
101: VPESLVTAEL AAAFPGNGGF VRWADHAFGP LAGSLLGTWK YLSIVINIAA YPALVADYLG GVAPAVAEPG RTRTGTVIGM TLFLSFVNYA GLSIVGWGTV
201: ALGIVSLAPF VLMTAMAVPK VRPRRWASQV NGRKDWRLFF NTLFWNLNYW DSASTMAGEV ERPERTFPRA LAVAVVLIAV SYLLPLMAAT GATDAPPDAW
301: VNGYLADAAG IIGGPWLKYW TGAGAVISSI GMFEAQMSSG SFQLLGMAEL GLVPSVFARR AAYTGTPWVA IAASTAVTIA VSFLGFDDVV ATANFLYSLG
401: TLLEFASFIW LRVKHPALKR PYRVPLPLPA LVAMCAVPSA FLAYVCAVAG WRVFAVAAGL TALGVGWHGI MRECRARKLL RFNNVVAAVH QEDAEDTV
Best Arabidopsis Sequence Match ( AT1G31830.1 )
(BLAST)
001: MQKRRIITVN PSASIEMSQY ENNEVPYSSV GADEVPSSPP KATDKIRKVS MLPLVFLIFY EVSGGPFGVE DSVNAAGPLL ALLGFVIFPF IWSIPEALIT
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR
Arabidopsis Description
Probable polyamine transporter At1g31830 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S5]
SUBAcon: [mitochondrion,plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.