Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0374900-00 | Rice | peroxisome, plasma membrane, vacuole | 50.72 | 31.82 |
| CDX75722 | Canola | plasma membrane | 37.2 | 28.52 |
| TraesCS5D01G321300.1 | Wheat | golgi, peroxisome, plasma membrane | 61.84 | 25.7 |
| TraesCS5A01G315000.1 | Wheat | golgi, peroxisome, plasma membrane | 61.84 | 25.7 |
| TraesCS5B01G316000.1 | Wheat | golgi, peroxisome, plasma membrane | 60.87 | 25.3 |
| HORVU4Hr1G085290.4 | Barley | golgi, peroxisome, plasma membrane | 52.66 | 21.5 |
| Zm00001d029314_P001 | Maize | plasma membrane | 48.79 | 21.04 |
| OQU92528 | Sorghum | plasma membrane | 49.76 | 20.85 |
| KXG39283 | Sorghum | plasma membrane | 51.21 | 20.35 |
| Os03t0375300-02 | Rice | nucleus | 51.21 | 19.38 |
| VIT_06s0004g00790.t01 | Wine grape | plasma membrane | 40.1 | 17.47 |
| AT3G13620.1 | Thale cress | plasma membrane | 39.13 | 16.95 |
| Solyc01g034080.1.1 | Tomato | plasma membrane | 38.16 | 16.81 |
| PGSC0003DMT400028298 | Potato | mitochondrion, plasma membrane | 38.16 | 16.81 |
| Bra027411.1-P | Field mustard | plasma membrane | 38.65 | 16.77 |
| Bra001514.1-P | Field mustard | plasma membrane | 38.65 | 16.77 |
| CDX75721 | Canola | plasma membrane | 38.65 | 16.77 |
| CDX97502 | Canola | plasma membrane | 38.65 | 16.77 |
| CDX82530 | Canola | plasma membrane | 38.65 | 16.77 |
| KRH42817 | Soybean | plasma membrane | 39.13 | 16.77 |
| PGSC0003DMT400082048 | Potato | plasma membrane | 38.16 | 16.7 |
| CDY23626 | Canola | plasma membrane | 38.16 | 16.63 |
| KRH58913 | Soybean | plasma membrane | 38.65 | 16.6 |
| KRH72395 | Soybean | plasma membrane | 37.68 | 16.6 |
| HORVU7Hr1G106710.2 | Barley | cytosol, plasma membrane | 41.06 | 16.54 |
| KRH16786 | Soybean | plasma membrane | 38.16 | 16.42 |
| Solyc01g005920.2.1 | Tomato | plasma membrane | 37.68 | 16.42 |
| VIT_06s0004g00800.t01 | Wine grape | plasma membrane | 38.16 | 16.36 |
| PGSC0003DMT400082047 | Potato | plasma membrane | 37.68 | 16.32 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plasma membrane | 32.37 | 14.44 |
| HORVU5Hr1G006170.3 | Barley | golgi, plasma membrane | 30.43 | 12.5 |
| HORVU5Hr1G019110.1 | Barley | plastid | 29.47 | 11.01 |
| HORVU6Hr1G068230.1 | Barley | plastid | 29.47 | 10.61 |
| HORVU3Hr1G005010.3 | Barley | vacuole | 1.93 | 1.66 |
| Zm00001d029318_P001 | Maize | plasma membrane | 0.97 | 0.66 |
| KRH45451 | Soybean | plasma membrane | 0.48 | 0.46 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G005120.1 | EnsemblPlantsGene:HORVU3Hr1G005120 | Gene3D:1.20.1740.10 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| ncoils:Coil | PANTHER:PTHR11785 | PANTHER:PTHR11785:SF378 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B4699E5 |
| UniProt:A0A287JZZ6 | MapMan:24.2.3.5.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:12589263..12590054
Molecular Weight (calculated)
18480.1 Da
IEP (calculated)
5.091
GRAVY (calculated)
0.199
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MNQEEIVTTK QPSLTQSSQE QQQHLQGHGI VAQAEHQLPL GHTTSESESE SESHHRRKIS LIPLVFLIYF EVAGGPYGSE KAVGAAGPLF TLLGFLIFPL
101: AWGVPESLVT AELAAAFPGN GGFVLWADHA FGPLAGSLLG TWKYLSITIN VAAYPALVAD YLGGVAPAIL XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
201: XXXGFMP
101: AWGVPESLVT AELAAAFPGN GGFVLWADHA FGPLAGSLLG TWKYLSITIN VAAYPALVAD YLGGVAPAIL XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
201: XXXGFMP
001: MAISEASKSS HELPVTTAES SGKKATAKKL TLIPLVFLIY FEVAGGPFGE EPAVQAAGPL LAILGFLIFP FIWSIPEALI TAELSTAFPG NGGFVIWAHR
101: AFGSFVGSMM GSLKFLSGVI NVASFPVLCV TYLDKLFPVL ESGWPRNVCI FASTVVLSFL NYTGLAIVGY AAVVLGLVSL SPFLVMSAMA IPKIKPHRWG
201: SLGTKKKDWN LYFNTLFWNL NFWDNVSTLA GEVDEPQKTF PLALLIAVIF TCVAYLIPLF AVTGAVSVDQ SRWENGFHAE AAEMIAGKWL KIWIEIGAVL
301: SSIGLFEAQL SSSAYQLEGM AELGFLPKFF GVRSKWFNTP WVGILISALM SLGLSYMNFT DIISSANFLY TLGMFLEFAS FIWLRRKLPQ LKRPYRVPLK
401: IPGLVVMCLI PSAFLVLILV FATKIVYLIC GVMTIGAIGW YFLINYFRKT KIFEFNEVID DLDNNVNGEH PKVDDHNS
101: AFGSFVGSMM GSLKFLSGVI NVASFPVLCV TYLDKLFPVL ESGWPRNVCI FASTVVLSFL NYTGLAIVGY AAVVLGLVSL SPFLVMSAMA IPKIKPHRWG
201: SLGTKKKDWN LYFNTLFWNL NFWDNVSTLA GEVDEPQKTF PLALLIAVIF TCVAYLIPLF AVTGAVSVDQ SRWENGFHAE AAEMIAGKWL KIWIEIGAVL
301: SSIGLFEAQL SSSAYQLEGM AELGFLPKFF GVRSKWFNTP WVGILISALM SLGLSYMNFT DIISSANFLY TLGMFLEFAS FIWLRRKLPQ LKRPYRVPLK
401: IPGLVVMCLI PSAFLVLILV FATKIVYLIC GVMTIGAIGW YFLINYFRKT KIFEFNEVID DLDNNVNGEH PKVDDHNS
Arabidopsis Description
PUT4 [Source:UniProtKB/TrEMBL;Acc:A0A178VLM5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.