Factsheet for GSMUA_AchrUn_randomP06940_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0375900-01	Rice	plasma membrane	25.65	57.49
Zm00001d029319_P001	Maize	endoplasmic reticulum, plasma membrane, plastid, vacuole	17.03	53.74
TraesCS7A01G464900.1	Wheat	golgi, plasma membrane, vacuole	54.31	52.39
TraesCS7B01G365600.1	Wheat	golgi, plasma membrane, vacuole	54.53	52.27
Zm00001d029321_P001	Maize	plasma membrane	54.09	51.65
TraesCS7D01G452600.1	Wheat	golgi, plasma membrane, vacuole	54.31	51.32
TraesCS5B01G533500.1	Wheat	plasma membrane	53.66	50.71
KRH45451	Soybean	plasma membrane	23.71	50.69
EER92206	Sorghum	plasma membrane	54.09	50.6
TraesCSU01G046900.1	Wheat	plasma membrane	16.16	50.34
HORVU7Hr1G106710.2	Barley	cytosol, plasma membrane	54.09	48.83
PGSC0003DMT400082048	Potato	plasma membrane	49.14	48.2
VIT_06s0004g00790.t01	Wine grape	plasma membrane	49.14	48.0
KRH72395	Soybean	plasma membrane	48.28	47.66
Solyc01g005920.2.1	Tomato	plasma membrane	48.49	47.37
TraesCS5D01G531700.1	Wheat	mitochondrion, plasma membrane	53.23	47.32
Solyc01g034080.1.1	Tomato	plasma membrane	47.41	46.81
PGSC0003DMT400028298	Potato	mitochondrion, plasma membrane	47.41	46.81
KRH58913	Soybean	plasma membrane	48.49	46.68
KRH16786	Soybean	plasma membrane	48.28	46.57
KRH42817	Soybean	plasma membrane	48.06	46.17
EER92207	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	25.0	46.03
Zm00001d029318_P001	Maize	plasma membrane	29.96	46.03
VIT_06s0004g00800.t01	Wine grape	plasma membrane	47.63	45.76
Bra001514.1-P	Field mustard	plasma membrane	46.77	45.49
CDX82530	Canola	plasma membrane	46.55	45.28
Zm00001d029314_P001	Maize	plasma membrane	46.77	45.21
TraesCS5D01G321300.1	Wheat	golgi, peroxisome, plasma membrane	48.49	45.18
CDX75721	Canola	plasma membrane	46.34	45.07
AT3G13620.1	Thale cress	plasma membrane	46.34	44.98
TraesCS5B01G316000.1	Wheat	golgi, peroxisome, plasma membrane	48.06	44.78
TraesCS5A01G315000.1	Wheat	golgi, peroxisome, plasma membrane	48.06	44.78
OQU92528	Sorghum	plasma membrane	47.63	44.74
TraesCS3A01G030900.1	Wheat	peroxisome, plasma membrane, vacuole	46.12	44.49
PGSC0003DMT400082047	Potato	plasma membrane	45.69	44.35
KXG39283	Sorghum	plasma membrane	49.78	44.34
CDX97502	Canola	plasma membrane	45.47	44.23
Bra027411.1-P	Field mustard	plasma membrane	45.47	44.23
Os03t0375966-00	Rice	cytosol, golgi, peroxisome	29.74	44.23
CDY23626	Canola	plasma membrane	45.26	44.21
TraesCS4B01G350000.1	Wheat	golgi, peroxisome, plasma membrane	47.2	43.8
TraesCS4D01G344800.1	Wheat	plasma membrane	47.2	43.2
TraesCS3B01G031700.1	Wheat	plasma membrane	46.77	42.89
TraesCS5D01G321700.1	Wheat	plasma membrane	17.67	42.71
HORVU4Hr1G085290.4	Barley	golgi, peroxisome, plasma membrane	46.34	42.41
TraesCS5D01G321500.1	Wheat	golgi, mitochondrion, plasma membrane, plastid, vacuole	17.46	42.19
Zm00001d029320_P001	Maize	plasma membrane	27.37	40.84
TraesCS5A01G315600.1	Wheat	extracellular, plasma membrane, vacuole	13.15	40.13
Os03t0374900-00	Rice	peroxisome, plasma membrane, vacuole	28.45	40.0
TraesCSU01G047000.1	Wheat	plasma membrane	25.65	39.27
TraesCSU01G202300.1	Wheat	plasma membrane	25.65	39.27
CDX75722	Canola	plasma membrane	21.55	37.04
HORVU3Hr1G005010.3	Barley	vacuole	18.97	36.51
GSMUA_Achr4P28240_001	Banana	plasma membrane	29.09	32.85
GSMUA_Achr1P27820_001	Banana	plasma membrane	30.17	32.41
HORVU3Hr1G005120.1	Barley	cytosol	14.44	32.37
GSMUA_Achr9P23200_001	Banana	plasma membrane	20.69	30.87
GSMUA_Achr4P11590_001	Banana	plasma membrane	20.04	29.71
GSMUA_Achr2P13450_001	Banana	plasma membrane	23.28	29.19
Os03t0375300-02	Rice	nucleus	32.54	27.61

Protein Annotations

Gene3D:1.20.1740.10	MapMan:24.2.3.5.1	InterPro:AA/rel_permease1	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0015203	GO:GO:0015846
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	GO:GO:1902047	EnsemblPlantsGene:GSMUA_AchrUn_randomG06940_001
EnsemblPlants:GSMUA_AchrUn_randomP06940_001	EnsemblPlants:GSMUA_AchrUn_randomT06940_001	UniProt:M0U705	PFAM:PF13520	PANTHER:PTHR11785	PANTHER:PTHR11785:SF378
TMHMM:TMhelix	UniParc:UPI00029604C8	SEG:seg	:	:	:

Description

amino acid permease family protein, putative [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG06940_001]

Coordinates

chrchrUn_random:-:30444814..30448610

Molecular Weight (calculated)

50500.6 Da

IEP (calculated)

5.102

GRAVY (calculated)

0.406

Length

464 amino acids

Sequence
(BLAST)

001: MSPEFQIHGH QSPRGEGAVG GASQSKESLE NMDSSIDLGE AVLPRNTAAK NPNKLTLLPL IFLIYFEVAG GPIPESLVTA ELATAIPGNG GFVLWADRAF
101: GPFCGSLMGT WKFLSGVINS AAFPVLCADY LARVEPSVAS GTPRGNDWRL FFNTLFWNLN FWDNASTMAG EVERPERTFP TALLSAGLMT SLGYLLPLMA
201: GTGAVDAPQD AWGNGFFADI AGSIAGRWLK YWIEVGAVLS AIGLYEAQLS SSAFQLLGMA NLRLLPRIFA SRAKWFLTPW AGILTSSLIT LAISFMSFND
301: IINSANFLYG LGMLMEFSAF LWLRKKEPNL KRPYRVPMRL PGLVLLCLVP SAFLIFVMAI ASWKVFAICA ALTALGIAVY YTMAVCKSRG CLAFMDEEET
401: NGEIGTEEFG KISAGLIDGL LGFDETSEGT YISHISWIGK LVVDTLLFFF FLLKQLSILI KESK

Best Arabidopsis Sequence Match ( AT3G13620.1 )
(BLAST)

001: MAISEASKSS HELPVTTAES SGKKATAKKL TLIPLVFLIY FEVAGGPFGE EPAVQAAGPL LAILGFLIFP FIWSIPEALI TAELSTAFPG NGGFVIWAHR
101: AFGSFVGSMM GSLKFLSGVI NVASFPVLCV TYLDKLFPVL ESGWPRNVCI FASTVVLSFL NYTGLAIVGY AAVVLGLVSL SPFLVMSAMA IPKIKPHRWG
201: SLGTKKKDWN LYFNTLFWNL NFWDNVSTLA GEVDEPQKTF PLALLIAVIF TCVAYLIPLF AVTGAVSVDQ SRWENGFHAE AAEMIAGKWL KIWIEIGAVL
301: SSIGLFEAQL SSSAYQLEGM AELGFLPKFF GVRSKWFNTP WVGILISALM SLGLSYMNFT DIISSANFLY TLGMFLEFAS FIWLRRKLPQ LKRPYRVPLK
401: IPGLVVMCLI PSAFLVLILV FATKIVYLIC GVMTIGAIGW YFLINYFRKT KIFEFNEVID DLDNNVNGEH PKVDDHNS

Arabidopsis Description

PUT4 [Source:UniProtKB/TrEMBL;Acc:A0A178VLM5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.