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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • plasma membrane 4
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX97502 Canola plasma membrane 99.16 99.16
CDY23626 Canola plasma membrane 98.11 98.53
Bra001514.1-P Field mustard plasma membrane 91.19 91.19
AT3G13620.1 Thale cress plasma membrane 90.15 89.96
KRH72395 Soybean plasma membrane 70.23 71.28
PGSC0003DMT400028298 Potato mitochondrion, plasma membrane 68.34 69.36
Solyc01g005920.2.1 Tomato plasma membrane 68.34 68.63
KRH16786 Soybean plasma membrane 69.18 68.61
Solyc01g034080.1.1 Tomato plasma membrane 67.51 68.51
PGSC0003DMT400082048 Potato plasma membrane 67.71 68.29
VIT_06s0004g00800.t01 Wine grape plasma membrane 68.34 67.49
KRH45451 Soybean plasma membrane 27.67 60.83
TraesCS7A01G464900.1 Wheat golgi, plasma membrane, vacuole 53.67 53.22
TraesCS7B01G365600.1 Wheat golgi, plasma membrane, vacuole 53.25 52.48
TraesCS7D01G452600.1 Wheat golgi, plasma membrane, vacuole 53.88 52.34
Zm00001d029321_P001 Maize plasma membrane 53.04 52.06
EER92207 Sorghum endoplasmic reticulum, plasma membrane, vacuole 27.46 51.98
TraesCS5B01G533500.1 Wheat plasma membrane 53.25 51.73
EER92206 Sorghum plasma membrane 53.25 51.21
Os03t0375966-00 Rice cytosol, golgi, peroxisome 33.33 50.96
HORVU7Hr1G106710.2 Barley cytosol, plasma membrane 53.88 50.0
Zm00001d029318_P001 Maize plasma membrane 31.45 49.67
TraesCSU01G047000.1 Wheat plasma membrane 31.03 48.84
TraesCSU01G202300.1 Wheat plasma membrane 31.03 48.84
TraesCS5D01G531700.1 Wheat mitochondrion, plasma membrane 53.25 48.66
TraesCS5D01G321300.1 Wheat golgi, peroxisome, plasma membrane 49.48 47.39
TraesCS5B01G316000.1 Wheat golgi, peroxisome, plasma membrane 49.48 47.39
TraesCS5A01G315000.1 Wheat golgi, peroxisome, plasma membrane 49.27 47.19
OQU92528 Sorghum plasma membrane 48.85 47.17
TraesCS4B01G350000.1 Wheat golgi, peroxisome, plasma membrane 49.27 47.0
Zm00001d029320_P001 Maize plasma membrane 30.61 46.95
Bra038217.1-P Field mustard golgi, plasma membrane, vacuole 46.96 46.86
Zm00001d029314_P001 Maize plasma membrane 46.96 46.67
Os03t0374900-00 Rice peroxisome, plasma membrane, vacuole 32.29 46.67
Os03t0375900-01 Rice plasma membrane 20.13 46.38
Bra022433.1-P Field mustard plasma membrane 46.54 46.35
TraesCSU01G046900.1 Wheat plasma membrane 14.47 46.31
TraesCS3A01G030900.1 Wheat peroxisome, plasma membrane, vacuole 46.54 46.15
TraesCS4D01G344800.1 Wheat plasma membrane 49.06 46.15
HORVU4Hr1G085290.4 Barley golgi, peroxisome, plasma membrane 48.85 45.96
GSMUA_AchrUn_... Banana cytosol, peroxisome, plasma membrane 44.23 45.47
KXG39283 Sorghum plasma membrane 49.27 45.11
Bra023209.1-P Field mustard plasma membrane 42.35 44.69
TraesCS3B01G031700.1 Wheat plasma membrane 46.54 43.87
HORVU3Hr1G005010.3 Barley vacuole 22.01 43.57
Zm00001d029319_P001 Maize endoplasmic reticulum, plasma membrane, plastid, vacuole 13.21 42.86
Bra023210.1-P Field mustard golgi, peroxisome, plasma membrane, plastid 42.98 41.16
Bra009122.1-P Field mustard plasma membrane 42.35 41.14
TraesCS5D01G321500.1 Wheat golgi, mitochondrion, plasma membrane, plastid, vacuole 15.93 39.58
TraesCS5D01G321700.1 Wheat plasma membrane 15.72 39.06
HORVU3Hr1G005120.1 Barley cytosol 16.77 38.65
TraesCS5A01G315600.1 Wheat extracellular, plasma membrane, vacuole 11.95 37.5
Os03t0375300-02 Rice nucleus 36.48 31.81
Protein Annotations
Gene3D:1.20.1740.10MapMan:24.2.3.5.1InterPro:AA/rel_permease1EnsemblPlantsGene:Bra027411EnsemblPlants:Bra027411.1EnsemblPlants:Bra027411.1-P
GO:GO:0003333GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015171GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085UniProt:M4EF49
PFAM:PF13520PIRSF:PIRSF006060PANTHER:PTHR11785PANTHER:PTHR11785:SF378TMHMM:TMhelixUniParc:UPI0002547F97
Description
AT3G13620 (E=1e-254) | amino acid permease family protein
Coordinates
chrA05:+:20773992..20775536
Molecular Weight (calculated)
52585.7 Da
IEP (calculated)
7.113
GRAVY (calculated)
0.590
Length
477 amino acids
Sequence
(BLAST)
001: MAITETSRSS HELPVTTFGS TTSTAKKLTL VPLIFLIYFE VAGGPFGEEP AVQAAGPLLA ILGFLIFPFI WSVPEALITA ELSTAFPGNG GFVIWAHRAF
101: GAFVGSMMGS LKFLSGVINV ASFPVLCVTY LDKLFPVLES GWPRNVCIFA STVVLSFLNY TGLAIVGYAA VVLGLVSLSP FLVMSAMAIP KIKPHRWGSL
201: GSKKKDWNLY FNTLFWNLNF WDNVSTLAGE VDNPQKTFPL ALLIAVIFTC VAYLIPLFAV TGAVSVDQSR WETGFHAEAA EMIAGKWLKI WIEVGAVLSS
301: IGLFEAQLSS SAYQLEGMAE LGFLPKFFGL RSKWFNTPWV GILLSALMSL GLSYMDFTDI VASANFIYTL GMFLEFASFV WLRKKLPELK RPYRVPLNIP
401: GLVVMCLVPS AFLVLIIVFA TKIVYLVSGL MTVGAVGWYF LINYLREKKI FEFNEDADLL DNGNGERKKV EDHHDSR
Best Arabidopsis Sequence Match ( AT3G13620.1 )
(BLAST)
001: MAISEASKSS HELPVTTAES SGKKATAKKL TLIPLVFLIY FEVAGGPFGE EPAVQAAGPL LAILGFLIFP FIWSIPEALI TAELSTAFPG NGGFVIWAHR
101: AFGSFVGSMM GSLKFLSGVI NVASFPVLCV TYLDKLFPVL ESGWPRNVCI FASTVVLSFL NYTGLAIVGY AAVVLGLVSL SPFLVMSAMA IPKIKPHRWG
201: SLGTKKKDWN LYFNTLFWNL NFWDNVSTLA GEVDEPQKTF PLALLIAVIF TCVAYLIPLF AVTGAVSVDQ SRWENGFHAE AAEMIAGKWL KIWIEIGAVL
301: SSIGLFEAQL SSSAYQLEGM AELGFLPKFF GVRSKWFNTP WVGILISALM SLGLSYMNFT DIISSANFLY TLGMFLEFAS FIWLRRKLPQ LKRPYRVPLK
401: IPGLVVMCLI PSAFLVLILV FATKIVYLIC GVMTIGAIGW YFLINYFRKT KIFEFNEVID DLDNNVNGEH PKVDDHNS
Arabidopsis Description
PUT4 [Source:UniProtKB/TrEMBL;Acc:A0A178VLM5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.