Factsheet for Os03t0375300-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
plasma membrane 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0374900-00	Rice	peroxisome, plasma membrane, vacuole	54.11	89.7
TraesCSU01G202300.1	Wheat	plasma membrane	39.85	71.95
TraesCSU01G047000.1	Wheat	plasma membrane	39.85	71.95
Os03t0375966-00	Rice	cytosol, golgi, peroxisome	34.37	60.26
TraesCS5D01G321300.1	Wheat	golgi, peroxisome, plasma membrane	50.09	55.02
TraesCS5B01G316000.1	Wheat	golgi, peroxisome, plasma membrane	49.91	54.82
KXG39283	Sorghum	plasma membrane	51.37	53.93
TraesCS5A01G315000.1	Wheat	golgi, peroxisome, plasma membrane	48.81	53.61
Zm00001d029314_P001	Maize	plasma membrane	46.25	52.71
HORVU3Hr1G005010.3	Barley	vacuole	23.22	52.7
OQU92528	Sorghum	plasma membrane	47.17	52.23
TraesCS3A01G030900.1	Wheat	peroxisome, plasma membrane, vacuole	45.89	52.18
HORVU3Hr1G005120.1	Barley	cytosol	19.38	51.21
TraesCS3B01G031700.1	Wheat	plasma membrane	46.98	50.79
CDX75722	Canola	plasma membrane	25.05	50.74
HORVU4Hr1G085290.4	Barley	golgi, peroxisome, plasma membrane	46.44	50.1
TraesCS4D01G344800.1	Wheat	plasma membrane	46.25	49.9
TraesCS4B01G350000.1	Wheat	golgi, peroxisome, plasma membrane	45.52	49.8
Zm00001d029318_P001	Maize	plasma membrane	23.58	42.72
KRH72395	Soybean	plasma membrane	33.09	38.51
KRH16786	Soybean	plasma membrane	33.27	37.84
VIT_06s0004g00790.t01	Wine grape	plasma membrane	32.54	37.47
PGSC0003DMT400082048	Potato	plasma membrane	32.18	37.21
Bra001514.1-P	Field mustard	plasma membrane	32.18	36.9
CDX75721	Canola	plasma membrane	32.18	36.9
Solyc01g005920.2.1	Tomato	plasma membrane	31.99	36.84
CDX82530	Canola	plasma membrane	31.99	36.69
CDY23626	Canola	plasma membrane	31.81	36.63
Bra027411.1-P	Field mustard	plasma membrane	31.81	36.48
CDX97502	Canola	plasma membrane	31.81	36.48
AT3G13620.1	Thale cress	plasma membrane	31.81	36.4
Solyc01g034080.1.1	Tomato	plasma membrane	31.08	36.17
PGSC0003DMT400082047	Potato	plasma membrane	31.44	35.98
PGSC0003DMT400028298	Potato	mitochondrion, plasma membrane	30.9	35.96
VIT_06s0004g00800.t01	Wine grape	plasma membrane	31.26	35.4
KRH42817	Soybean	plasma membrane	31.08	35.2
KRH58913	Soybean	plasma membrane	30.9	35.06
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	27.61	32.54
Os02t0700500-01	Rice	cytosol, peroxisome, plasma membrane	28.52	29.38
Os12t0580400-01	Rice	plasma membrane	26.14	28.83
Os03t0576900-01	Rice	plastid	27.06	26.91
TraesCSU01G046900.1	Wheat	plasma membrane	5.67	20.81
Os03t0375900-01	Rice	plasma membrane	6.58	17.39
TraesCS5A01G315600.1	Wheat	extracellular, plasma membrane, vacuole	4.57	16.45
TraesCS5D01G321700.1	Wheat	plasma membrane	5.48	15.62
TraesCS5D01G321500.1	Wheat	golgi, mitochondrion, plasma membrane, plastid, vacuole	5.3	15.1
KRH45451	Soybean	plasma membrane	5.85	14.75

Protein Annotations

Gene3D:1.20.1740.10	MapMan:24.2.3.5.1	InterPro:AA/rel_permease1	ProteinID:ABF96215.1	ProteinID:BAS84402.1	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810
GO:GO:0008150	GO:GO:0015203	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	GO:GO:1902047	EnsemblPlantsGene:Os03g0375300	EnsemblPlants:Os03t0375300-02	PFAM:PF13520	PANTHER:PTHR11785
PANTHER:PTHR11785:SF378	UniProt:Q10KQ0	TMHMM:TMhelix	UniParc:UPI0000DB4284	SEG:seg	:

Description

OsLAT3Similar to cationic amino acid transporter. (Os03t0375300-01);Similar to cationic amino acid transporter. (Os03t0375300-02);Similar to cationic amino acid transporter. (Os03t0375300-03)

Coordinates

chr3:-:14790176..14798028

Molecular Weight (calculated)

59976.1 Da

IEP (calculated)

12.417

GRAVY (calculated)

-0.270

Length

547 amino acids

Sequence
(BLAST)

001: MSELTMDQEI QLNQRPSPQR QQQAQEHGGA TAPAPAPATP QDDEQQGHQA AVARHGCGGA TAERHHQTKL TLLPLVFFIY FEVAGGPYGA EQAVSAAGPL
101: FALLGFLAFP FAWGVPVSLV TAELAAALPG NGGFVVWADR AFGPLAGSLL GTWKYLSCVI NLAAFPALVA DYLGRVAPAV AVPGSRARTG TVLGMTVFLS
201: FLNLGGLSIV GWGAVALGFV SLAPFVLMTA MAAPRTRPRR WAARVQVKGK RDWRLFFNTL FWNLNYWDSA STMAGEVERP ERTFPRALAV AVVLIAVSYL
301: LPLMAAVGAT DAPPEAWENG YLADAAATKL VRNLKGPATS IPLYQNYNSL HHRRAVAQVL DGGRRGALLR RVVRSAAEQR RVPAPRHGGA GPPPLRLRPP
401: RPRTIRHPVG RRRRLRRRLG RRLLPRLRRR RRHRQPALQP RRAARVRRLP PAPREGGEPL LAQAPLPRPA AAPRARRHVP RAVGVPGVRG RRRRVEGLRR
501: RRRAHGPRRR LARRHEGVQV QEVAQVQHRG CRRPSSATTR CSSSSCW

Best Arabidopsis Sequence Match ( AT1G31820.1 )
(BLAST)

001: MGDYNMNEFA YGNLYDDDDG DVGGSSKEGN NSIQKVSMLP LVFLIFYEVS GGPFGAEGSV NAAGPLLALL GFVIFPFIWC IPEALITAEM STMFPINGGF
101: VVWVSSALGT FWGFQVGWMK WLCGVIDNAL YPVLFLDYLK SAVPALATGL PRVASILILT LLLTYLNYRG LTIVGWTAVF MGVFSMLPFA VMSLVSIPQL
201: EPSRWLVMDL GNVNWNLYLN TLLWNLNYWD SVSTLAGEVA NPKKTLPKAL CYGVIFVALS NFLPLLSGTG AIPLDRELWT DGYLAEVAKA IGGGWLQLWV
301: QAAAATSNMG MFLAEMSSDS FQLLGMAELG ILPEIFAQRS RYGTPLLGIL FSASGVLLLS GLSFQEIIAA ENLLYCGGMI LEFIAFVRLR KKHPAASRPY
401: KIPVGTVGSI LICVPPIVLI CLVIVLSTIK VALVSFVMVV IGFLMKPCLN HMDGKKWVKF SVCSDLAEFQ KENLDCEESL LR

Arabidopsis Description

Probable polyamine transporter At1g31820 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.