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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d029314_P001 Maize plasma membrane 85.83 88.33
KXG39283 Sorghum plasma membrane 76.11 72.17
TraesCS5D01G321300.1 Wheat golgi, peroxisome, plasma membrane 71.66 71.08
TraesCS5B01G316000.1 Wheat golgi, peroxisome, plasma membrane 71.05 70.48
Os03t0374900-00 Rice peroxisome, plasma membrane, vacuole 46.96 70.3
TraesCS5A01G315000.1 Wheat golgi, peroxisome, plasma membrane 70.04 69.48
TraesCS3A01G030900.1 Wheat peroxisome, plasma membrane, vacuole 67.21 69.02
TraesCS4B01G350000.1 Wheat golgi, peroxisome, plasma membrane 69.84 69.0
TraesCSU01G047000.1 Wheat plasma membrane 42.31 68.98
TraesCSU01G202300.1 Wheat plasma membrane 42.31 68.98
TraesCS4D01G344800.1 Wheat plasma membrane 70.04 68.24
TraesCS3B01G031700.1 Wheat plasma membrane 68.02 66.4
HORVU4Hr1G085290.4 Barley golgi, peroxisome, plasma membrane 67.21 65.48
TraesCSU01G046900.1 Wheat plasma membrane 19.23 63.76
HORVU3Hr1G005010.3 Barley vacuole 30.16 61.83
EER92207 Sorghum endoplasmic reticulum, plasma membrane, vacuole 30.36 59.52
TraesCS5D01G321700.1 Wheat plasma membrane 21.86 56.25
EER92206 Sorghum plasma membrane 55.67 55.44
TraesCS5A01G315600.1 Wheat extracellular, plasma membrane, vacuole 17.0 55.26
TraesCS5D01G321500.1 Wheat golgi, mitochondrion, plasma membrane, plastid, vacuole 21.46 55.21
VIT_06s0004g00790.t01 Wine grape plasma membrane 48.38 50.32
KRH72395 Soybean plasma membrane 47.77 50.21
HORVU3Hr1G005120.1 Barley cytosol 20.85 49.76
CDX75722 Canola plasma membrane 27.13 49.63
KRH42817 Soybean plasma membrane 48.18 49.28
KRH16786 Soybean plasma membrane 47.98 49.27
PGSC0003DMT400082048 Potato plasma membrane 47.17 49.26
KRH58913 Soybean plasma membrane 47.98 49.17
VIT_06s0004g00800.t01 Wine grape plasma membrane 47.98 49.07
Bra027411.1-P Field mustard plasma membrane 47.17 48.85
CDX97502 Canola plasma membrane 47.17 48.85
Solyc01g005920.2.1 Tomato plasma membrane 46.96 48.84
CDY23626 Canola plasma membrane 46.96 48.84
Bra001514.1-P Field mustard plasma membrane 46.96 48.64
CDX75721 Canola plasma membrane 46.96 48.64
CDX82530 Canola plasma membrane 46.96 48.64
Solyc01g034080.1.1 Tomato plasma membrane 45.75 48.09
PGSC0003DMT400028298 Potato mitochondrion, plasma membrane 45.75 48.09
AT3G13620.1 Thale cress plasma membrane 46.36 47.91
PGSC0003DMT400082047 Potato plasma membrane 46.15 47.7
GSMUA_AchrUn_... Banana cytosol, peroxisome, plasma membrane 44.74 47.63
Os03t0375300-02 Rice nucleus 52.23 47.17
KRH45451 Soybean plasma membrane 19.64 44.7
EES13409 Sorghum plasma membrane 39.27 39.35
EES16229 Sorghum plasma membrane 38.66 38.9
OQU85562 Sorghum peroxisome, plasma membrane, vacuole 40.89 37.55
Protein Annotations
Gene3D:1.20.1740.10MapMan:24.2.3.5.1UniProt:A0A1Z5S9E3InterPro:AA/rel_permease1GO:GO:0003333GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015171GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlants:OQU92528ProteinID:OQU92528ProteinID:OQU92528.1
PFAM:PF13520PIRSF:PIRSF006060PANTHER:PTHR11785PANTHER:PTHR11785:SF378EnsemblPlantsGene:SORBI_3001G357800TMHMM:TMhelix
UniParc:UPI000B8BAF70SEG:seg::::
Description
hypothetical protein
Coordinates
chr1:+:64756812..64762044
Molecular Weight (calculated)
51795.8 Da
IEP (calculated)
8.388
GRAVY (calculated)
0.469
Length
494 amino acids
Sequence
(BLAST)
001: MDHQNQTIQA PLLQHHQQQH GTSVQGGGGG GEADSHGHGH RHGSNNSNKL TFLPLVFLIY FEVAGGAYGA ELAVKAAGPL FTLLGFLVFP FAWGVPESLV
101: TAELAAALPG NGGFVLWADR AFGPLAGSLL GTWKYLSCVV NVAAYPALVA DYLGQAVVPS AGGSGTRTAT VAGITVLLSL VNFTGLSVVG WGAVALGLVS
201: LAPSVLMTAM AVPKVRPRRW WTVEGGGRSR DWPLFFNTVF WNLNYWDSAS TMAGEVERPE RTFPRALGVA VVLIAASYLL PLMAATGATD APPEAWTNGY
301: LGDAAGIIGG PWLKLWTQAG AVLSSIGMFE AQLSSGAYQL LGMADLGLLP SAFARRGTGC CCCSRTPWVA VAASSAVTLA VSFMAFDEVV AAANFLYSLG
401: TLLEFAAFLW LRAAQPGLKR PYRVPLASLP ALAAMCAVPS AFLVYVCVVA GWKVFALAGA LTALGVGLHA AMRLCRAKRW LRFEGQQGQG EHTV
Best Arabidopsis Sequence Match ( AT3G13620.1 )
(BLAST)
001: MAISEASKSS HELPVTTAES SGKKATAKKL TLIPLVFLIY FEVAGGPFGE EPAVQAAGPL LAILGFLIFP FIWSIPEALI TAELSTAFPG NGGFVIWAHR
101: AFGSFVGSMM GSLKFLSGVI NVASFPVLCV TYLDKLFPVL ESGWPRNVCI FASTVVLSFL NYTGLAIVGY AAVVLGLVSL SPFLVMSAMA IPKIKPHRWG
201: SLGTKKKDWN LYFNTLFWNL NFWDNVSTLA GEVDEPQKTF PLALLIAVIF TCVAYLIPLF AVTGAVSVDQ SRWENGFHAE AAEMIAGKWL KIWIEIGAVL
301: SSIGLFEAQL SSSAYQLEGM AELGFLPKFF GVRSKWFNTP WVGILISALM SLGLSYMNFT DIISSANFLY TLGMFLEFAS FIWLRRKLPQ LKRPYRVPLK
401: IPGLVVMCLI PSAFLVLILV FATKIVYLIC GVMTIGAIGW YFLINYFRKT KIFEFNEVID DLDNNVNGEH PKVDDHNS
Arabidopsis Description
PUT4 [Source:UniProtKB/TrEMBL;Acc:A0A178VLM5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.