Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029320_P001 | Maize | plasma membrane | 88.1 | 71.38 |
| CDX75722 | Canola | plasma membrane | 47.22 | 44.07 |
| EER92206 | Sorghum | plasma membrane | 68.25 | 34.68 |
| OQU92528 | Sorghum | plasma membrane | 59.52 | 30.36 |
| KXG39283 | Sorghum | plasma membrane | 61.51 | 29.75 |
| Solyc01g005920.2.1 | Tomato | plasma membrane | 53.57 | 28.42 |
| PGSC0003DMT400082048 | Potato | plasma membrane | 53.17 | 28.33 |
| KRH72395 | Soybean | plasma membrane | 52.78 | 28.3 |
| VIT_06s0004g00790.t01 | Wine grape | plasma membrane | 53.17 | 28.21 |
| KRH16786 | Soybean | plasma membrane | 53.17 | 27.86 |
| Bra001514.1-P | Field mustard | plasma membrane | 52.38 | 27.67 |
| CDX75721 | Canola | plasma membrane | 52.38 | 27.67 |
| CDX82530 | Canola | plasma membrane | 52.38 | 27.67 |
| CDY23626 | Canola | plasma membrane | 51.98 | 27.58 |
| Bra027411.1-P | Field mustard | plasma membrane | 51.98 | 27.46 |
| CDX97502 | Canola | plasma membrane | 51.98 | 27.46 |
| VIT_06s0004g00800.t01 | Wine grape | plasma membrane | 52.38 | 27.33 |
| AT3G13620.1 | Thale cress | plasma membrane | 51.19 | 26.99 |
| Solyc01g034080.1.1 | Tomato | plasma membrane | 50.0 | 26.81 |
| PGSC0003DMT400028298 | Potato | mitochondrion, plasma membrane | 49.6 | 26.6 |
| KRH58913 | Soybean | plasma membrane | 50.79 | 26.56 |
| KRH42817 | Soybean | plasma membrane | 50.0 | 26.09 |
| PGSC0003DMT400082047 | Potato | plasma membrane | 49.21 | 25.94 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plasma membrane | 46.03 | 25.0 |
| EES13409 | Sorghum | plasma membrane | 44.84 | 22.92 |
| EES16229 | Sorghum | plasma membrane | 42.06 | 21.59 |
| OQU85562 | Sorghum | peroxisome, plasma membrane, vacuole | 44.84 | 21.0 |
| KRH45451 | Soybean | plasma membrane | 2.78 | 3.23 |
| Zm00001d029319_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid, vacuole | 1.19 | 2.04 |
Protein Annotations
| Gene3D:1.20.1740.10 | MapMan:24.2.3.5.1 | InterPro:AA/rel_permease1 | UniProt:C5WYM8 | EnsemblPlants:EER92207 | ProteinID:EER92207 |
| ProteinID:EER92207.1 | GO:GO:0003333 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015171 | GO:GO:0015203 |
| GO:GO:0015297 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | GO:GO:1902047 |
| PFAM:PF13520 | PANTHER:PTHR11785 | PANTHER:PTHR11785:SF378 | EnsemblPlantsGene:SORBI_3001G357600 | SignalP:SignalP-TM | TMHMM:TMhelix |
| UniParc:UPI0001A821DA | RefSeq:XP_002465209.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:64734695..64735480
Molecular Weight (calculated)
26160.7 Da
IEP (calculated)
7.127
GRAVY (calculated)
0.565
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLFPLIFLI FFEVAGGPYG AEPVVQAGGP LLALIGFFVF PFVWAVPESL VTAELSSAMP GNGGYVVWVD RAFGPFAGSL MGTWKYVCSA IGAAAFPALC
101: SDYLTRVAPA VSRPAAAAAA GSRRSSPTRG WTAVALGLPA LSPFLLMVGA ALPKVRPRRW GGTATATAGD KDWKLLLNTL FWNLNGWDSV STMAGEVDRP
201: GRTFPAALVS AVCIGSLGYV LPLMAATGAI DAPPEAWGDG YFADAACAHV TV
101: SDYLTRVAPA VSRPAAAAAA GSRRSSPTRG WTAVALGLPA LSPFLLMVGA ALPKVRPRRW GGTATATAGD KDWKLLLNTL FWNLNGWDSV STMAGEVDRP
201: GRTFPAALVS AVCIGSLGYV LPLMAATGAI DAPPEAWGDG YFADAACAHV TV
001: MGDYNMNEFA YGNLYDDDDG DVGGSSKEGN NSIQKVSMLP LVFLIFYEVS GGPFGAEGSV NAAGPLLALL GFVIFPFIWC IPEALITAEM STMFPINGGF
101: VVWVSSALGT FWGFQVGWMK WLCGVIDNAL YPVLFLDYLK SAVPALATGL PRVASILILT LLLTYLNYRG LTIVGWTAVF MGVFSMLPFA VMSLVSIPQL
201: EPSRWLVMDL GNVNWNLYLN TLLWNLNYWD SVSTLAGEVA NPKKTLPKAL CYGVIFVALS NFLPLLSGTG AIPLDRELWT DGYLAEVAKA IGGGWLQLWV
301: QAAAATSNMG MFLAEMSSDS FQLLGMAELG ILPEIFAQRS RYGTPLLGIL FSASGVLLLS GLSFQEIIAA ENLLYCGGMI LEFIAFVRLR KKHPAASRPY
401: KIPVGTVGSI LICVPPIVLI CLVIVLSTIK VALVSFVMVV IGFLMKPCLN HMDGKKWVKF SVCSDLAEFQ KENLDCEESL LR
101: VVWVSSALGT FWGFQVGWMK WLCGVIDNAL YPVLFLDYLK SAVPALATGL PRVASILILT LLLTYLNYRG LTIVGWTAVF MGVFSMLPFA VMSLVSIPQL
201: EPSRWLVMDL GNVNWNLYLN TLLWNLNYWD SVSTLAGEVA NPKKTLPKAL CYGVIFVALS NFLPLLSGTG AIPLDRELWT DGYLAEVAKA IGGGWLQLWV
301: QAAAATSNMG MFLAEMSSDS FQLLGMAELG ILPEIFAQRS RYGTPLLGIL FSASGVLLLS GLSFQEIIAA ENLLYCGGMI LEFIAFVRLR KKHPAASRPY
401: KIPVGTVGSI LICVPPIVLI CLVIVLSTIK VALVSFVMVV IGFLMKPCLN HMDGKKWVKF SVCSDLAEFQ KENLDCEESL LR
Arabidopsis Description
Probable polyamine transporter At1g31820 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.