Factsheet for PGSC0003DMT400082048

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
plasma membrane 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g005920.2.1	Tomato	plasma membrane	96.41	96.0
PGSC0003DMT400028298	Potato	mitochondrion, plasma membrane	77.8	78.3
KRH72395	Soybean	plasma membrane	72.3	72.77
KRH16786	Soybean	plasma membrane	71.88	70.69
VIT_06s0004g00800.t01	Wine grape	plasma membrane	70.61	69.15
Bra001514.1-P	Field mustard	plasma membrane	69.56	68.97
CDX82530	Canola	plasma membrane	69.56	68.97
CDX75721	Canola	plasma membrane	69.13	68.55
CDY23626	Canola	plasma membrane	68.29	68.0
CDX97502	Canola	plasma membrane	68.29	67.71
Bra027411.1-P	Field mustard	plasma membrane	68.29	67.71
AT3G13620.1	Thale cress	plasma membrane	68.08	67.36
CDX75722	Canola	plasma membrane	38.27	67.04
KRH45451	Soybean	plasma membrane	28.54	62.21
PGSC0003DMT400082047	Potato	plasma membrane	62.79	62.13
TraesCS7A01G464900.1	Wheat	golgi, plasma membrane, vacuole	56.87	55.93
TraesCS7B01G365600.1	Wheat	golgi, plasma membrane, vacuole	56.87	55.58
TraesCS7D01G452600.1	Wheat	golgi, plasma membrane, vacuole	56.66	54.58
TraesCS5B01G533500.1	Wheat	plasma membrane	56.45	54.38
Zm00001d029321_P001	Maize	plasma membrane	54.97	53.5
EER92207	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	28.33	53.17
HORVU7Hr1G106710.2	Barley	cytosol, plasma membrane	57.08	52.53
Os03t0375966-00	Rice	cytosol, golgi, peroxisome	34.25	51.92
Zm00001d029318_P001	Maize	plasma membrane	32.77	51.32
TraesCSU01G202300.1	Wheat	plasma membrane	32.77	51.16
TraesCSU01G047000.1	Wheat	plasma membrane	32.77	51.16
TraesCS5B01G316000.1	Wheat	golgi, peroxisome, plasma membrane	53.7	51.0
TraesCS4B01G350000.1	Wheat	golgi, peroxisome, plasma membrane	53.91	51.0
TraesCS5D01G531700.1	Wheat	mitochondrion, plasma membrane	56.24	50.96
TraesCS5D01G321300.1	Wheat	golgi, peroxisome, plasma membrane	53.49	50.8
EER92206	Sorghum	plasma membrane	53.07	50.6
TraesCS5A01G315000.1	Wheat	golgi, peroxisome, plasma membrane	53.28	50.6
TraesCS3A01G030900.1	Wheat	peroxisome, plasma membrane, vacuole	51.16	50.31
TraesCS4D01G344800.1	Wheat	plasma membrane	53.07	49.51
HORVU4Hr1G085290.4	Barley	golgi, peroxisome, plasma membrane	52.85	49.31
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	48.2	49.14
TraesCSU01G046900.1	Wheat	plasma membrane	15.43	48.99
Zm00001d029320_P001	Maize	plasma membrane	32.14	48.87
Os03t0374900-00	Rice	peroxisome, plasma membrane, vacuole	33.62	48.18
Zm00001d029314_P001	Maize	plasma membrane	48.84	48.12
KXG39283	Sorghum	plasma membrane	52.85	47.98
TraesCS3B01G031700.1	Wheat	plasma membrane	50.95	47.63
OQU92528	Sorghum	plasma membrane	49.26	47.17
Os03t0375900-01	Rice	plasma membrane	20.51	46.86
HORVU3Hr1G005010.3	Barley	vacuole	23.26	45.64
PGSC0003DMT400047497	Potato	plasma membrane	45.03	45.42
PGSC0003DMT400067464	Potato	plasma membrane	43.76	44.23
Zm00001d029319_P001	Maize	endoplasmic reticulum, plasma membrane, plastid, vacuole	13.53	43.54
PGSC0003DMT400013939	Potato	plasma membrane	45.24	43.15
TraesCS5D01G321500.1	Wheat	golgi, mitochondrion, plasma membrane, plastid, vacuole	17.34	42.71
PGSC0003DMT400008784	Potato	plasma membrane	41.65	42.37
TraesCS5D01G321700.1	Wheat	plasma membrane	17.12	42.19
TraesCS5A01G315600.1	Wheat	extracellular, plasma membrane, vacuole	12.69	39.47
HORVU3Hr1G005120.1	Barley	cytosol	16.7	38.16
Os03t0375300-02	Rice	nucleus	37.21	32.18

Protein Annotations

Gene3D:1.20.1740.10	EntrezGene:102603417	MapMan:24.2.3.5.1	InterPro:AA/rel_permease1	GO:GO:0003333	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	UniProt:M1D5I8	PFAM:PF13520	EnsemblPlantsGene:PGSC0003DMG400032227
PGSC:PGSC0003DMG400032227	EnsemblPlants:PGSC0003DMT400082048	PIRSF:PIRSF006060	PANTHER:PTHR11785	PANTHER:PTHR11785:SF378	TMHMM:TMhelix
UniParc:UPI000294D936	RefSeq:XP_006354149.1	SEG:seg	:	:	:

Description

Amino acid transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400032227]

Coordinates

chr1:-:1459458..1462273

Molecular Weight (calculated)

52836.5 Da

IEP (calculated)

8.419

GRAVY (calculated)

0.556

Length

473 amino acids

Sequence
(BLAST)

001: MTQNLDSPSS TIEPPQHLPT TTNPTTPKKN HKLTLIPLIF LIYFEVAGGP YGEEPAVKAA GPLLAILGFL IFPFIWSVPE ALITAELSTT FPGNGGFVIW
101: ADKAFGPFWG SLMGSWKFLT GVINIASFPV LCISYLEEIF PILDSGVPRK LAILGSTLFL SLVNYTGLTI VGYVAVALGV ISLAPFIIMS LIAIPKIHPH
201: RWLSLGQKGV KKDWNLFFNT LFWNLNFWDN VSTMAGEVEN PRKTFPLALF SSVVFTCLGY IIPLMAVTGA VDLDQRDWDT GFMANAAEII SGRWLKFWIE
301: IGAVLSTIGL FEAQLSSSAF QILGMAEIAF LPKFFGLRSK WFNTPWVGIV LSTTISLGMS YMNFQDIISS ANFLYSLGML LEFASFLWLR RKFPLIKRPY
401: RVPMRLPLLV IMCLVPCGFL VFIMTIATKL VYLISGLMTI GGIGWYFLMQ YCKSKKLLKF NDKVDDTYEE YVE

Best Arabidopsis Sequence Match ( AT3G13620.1 )
(BLAST)

001: MAISEASKSS HELPVTTAES SGKKATAKKL TLIPLVFLIY FEVAGGPFGE EPAVQAAGPL LAILGFLIFP FIWSIPEALI TAELSTAFPG NGGFVIWAHR
101: AFGSFVGSMM GSLKFLSGVI NVASFPVLCV TYLDKLFPVL ESGWPRNVCI FASTVVLSFL NYTGLAIVGY AAVVLGLVSL SPFLVMSAMA IPKIKPHRWG
201: SLGTKKKDWN LYFNTLFWNL NFWDNVSTLA GEVDEPQKTF PLALLIAVIF TCVAYLIPLF AVTGAVSVDQ SRWENGFHAE AAEMIAGKWL KIWIEIGAVL
301: SSIGLFEAQL SSSAYQLEGM AELGFLPKFF GVRSKWFNTP WVGILISALM SLGLSYMNFT DIISSANFLY TLGMFLEFAS FIWLRRKLPQ LKRPYRVPLK
401: IPGLVVMCLI PSAFLVLILV FATKIVYLIC GVMTIGAIGW YFLINYFRKT KIFEFNEVID DLDNNVNGEH PKVDDHNS

Arabidopsis Description

PUT4 [Source:UniProtKB/TrEMBL;Acc:A0A178VLM5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.