Factsheet for PGSC0003DMT400013939

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g049640.1.1	Tomato	plasma membrane	91.73	92.86
VIT_03s0091g00600.t01	Wine grape	plasma membrane	78.63	77.38
Bra022433.1-P	Field mustard	plasma membrane	70.77	73.28
CDY46166	Canola	plasma membrane	70.56	73.07
CDY42190	Canola	golgi, plasma membrane, vacuole	69.96	72.59
CDX99215	Canola	plasma membrane	70.36	72.41
Bra038217.1-P	Field mustard	golgi, plasma membrane, vacuole	69.76	72.38
AT3G19553.1	Thale cress	plasma membrane	69.76	72.23
CDY69762	Canola	golgi, plasma membrane, vacuole	69.35	71.97
KRH77938	Soybean	plasma membrane	68.15	69.98
GSMUA_Achr2P13450_001	Banana	plasma membrane	48.19	64.59
GSMUA_Achr4P28240_001	Banana	plasma membrane	52.22	63.02
TraesCS5D01G085800.1	Wheat	golgi, plasma membrane, vacuole	55.85	57.23
EES16229	Sorghum	plasma membrane	56.45	57.03
TraesCS5B01G079100.1	Wheat	golgi, plasma membrane, vacuole	55.44	56.7
TraesCS5A01G073000.1	Wheat	golgi, plasma membrane, vacuole	55.24	56.49
Zm00001d030832_P001	Maize	plasma membrane	56.45	56.34
Os12t0580400-01	Rice	plasma membrane	53.83	53.83
PGSC0003DMT400047497	Potato	plasma membrane	50.81	53.73
PGSC0003DMT400067464	Potato	plasma membrane	50.4	53.42
PGSC0003DMT400008784	Potato	plasma membrane	49.6	52.9
HORVU5Hr1G019110.1	Barley	plastid	55.24	49.46
PGSC0003DMT400082048	Potato	plasma membrane	43.15	45.24
PGSC0003DMT400082047	Potato	plasma membrane	42.74	44.35
PGSC0003DMT400028298	Potato	mitochondrion, plasma membrane	41.53	43.83

Protein Annotations

Gene3D:1.20.1740.10	EntrezGene:102582764	MapMan:24.2.3.5.1	InterPro:AA/rel_permease1	GO:GO:0003333	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	GO:GO:1902047	UniProt:M1A3I1	PFAM:PF13520
EnsemblPlantsGene:PGSC0003DMG400005455	PGSC:PGSC0003DMG400005455	EnsemblPlants:PGSC0003DMT400013939	PIRSF:PIRSF006060	PANTHER:PTHR11785	PANTHER:PTHR11785:SF338
TMHMM:TMhelix	UniParc:UPI0002968111	SEG:seg	:	:	:

Description

Neutral amino acid transport protein [Source:PGSC_GENE;Acc:PGSC0003DMG400005455]

Coordinates

chr10:+:14769090..14771729

Molecular Weight (calculated)

55121.7 Da

IEP (calculated)

6.262

GRAVY (calculated)

0.444

Length

496 amino acids

Sequence
(BLAST)

001: MVNDIKNTAN DKKNPKLTLL PLIALIFYDV SGGPFGIEDS VKAGGGPLLP LLGFLIFPLL WSIPEALITA ELATSFPQNG GYVIWISSAF GPFWGFQEGF
101: WKWFSGVMDN ALYPVLFLDY LKHSLPIFTH LIARIPALLG ITVSLTYMNY RGLHIVGFST VLLASFSLLP FLVMGILSIP RIRPRKWFVV DFKKVEWRGF
201: FNNMFWNLNY WDKASTVAGE VEDPSRTFPK ALLGAVVLVV LSYIIPLLAG TGALNSNPSE WSDGYFAEAG MLIGGLWLKW WIQAAAAMSN MGLFEAEMSS
301: DAFQLLGMSE IGMLPSIFAS RSKYGTPTIS ILCSATGVIF LSWMTFQEIL EFLNFLYSVG MLLEFAAFIN LRIKKPDLHR PYKVPLQTVG ATLLCLPPSL
401: LLLFVMYLAS LKTFIVSGSV IILGLFLYPA VMYAKEKKWC HFNTREQLGL SNDLEDRSSP TELDQVVADD ASLSLLGHSK TVQDSKTLSQ EISTVD

Best Arabidopsis Sequence Match ( AT3G19553.1 )
(BLAST)

001: MGEEETIVND ENSSKPKPSP KLTLLPLVFL IFYEVSGGPF GVEDSVKSGG GPLLALLGFL IFPLIWSIPE ALVTAELATS FPENGGYVVW ISSAFGPFWG
101: FQEGFWKWFS GVMDNALYPV LFLDYLKHSF PVLDHVAARV PALLVITFSL TYLNYRGLHI VGFSAVVLAV FSLCPFVVMA LLAVPNIRPK RWLFVDTQKI
201: NWRGYFNTMF WNLNYWDKAS TLAGEVDRPG KTFPKALFGA VLLVMGSYLI PLMAGTGALS SSTSGEWSDG YFAEVGMLIG GVWLKGWIQA AAAMSNLGLF
301: EAEMSSDAFQ LLGMSEIGML PAFFAQRSKY GTPTISILCS ATGVIFLSWM SFQEIIEFLN FLYALGMLLE FAAFVKLRIK KPDLHRPYRV PLNTFGVSML
401: CLPPSLLVIL VMVLAAPKTF LISGVIIVLG FCLYPFLTLV KEKQWARFIP EETRPVSGVS SESQLDEEHG DESAASLLP

Arabidopsis Description

PUT5 [Source:UniProtKB/TrEMBL;Acc:A0A178VGC5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.