Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G085800.1 | Wheat | golgi, plasma membrane, vacuole | 97.94 | 98.14 |
| TraesCS5A01G073000.1 | Wheat | golgi, plasma membrane, vacuole | 97.73 | 97.73 |
| HORVU5Hr1G019110.1 | Barley | plastid | 94.85 | 83.03 |
| Os12t0580400-01 | Rice | plasma membrane | 84.74 | 82.86 |
| EES16229 | Sorghum | plasma membrane | 82.47 | 81.47 |
| Zm00001d030832_P001 | Maize | plasma membrane | 82.06 | 80.08 |
| GSMUA_Achr2P13450_001 | Banana | plasma membrane | 45.57 | 59.73 |
| Bra038217.1-P | Field mustard | golgi, plasma membrane, vacuole | 57.94 | 58.79 |
| CDY42190 | Canola | golgi, plasma membrane, vacuole | 57.73 | 58.58 |
| AT3G19553.1 | Thale cress | plasma membrane | 57.73 | 58.46 |
| CDY69762 | Canola | golgi, plasma membrane, vacuole | 57.53 | 58.37 |
| CDX99215 | Canola | plasma membrane | 57.94 | 58.3 |
| Bra022433.1-P | Field mustard | plasma membrane | 57.53 | 58.25 |
| CDY46166 | Canola | plasma membrane | 57.11 | 57.83 |
| VIT_03s0091g00600.t01 | Wine grape | plasma membrane | 58.14 | 55.95 |
| KRH77938 | Soybean | plasma membrane | 55.46 | 55.69 |
| PGSC0003DMT400013939 | Potato | plasma membrane | 56.7 | 55.44 |
| Solyc10g049640.1.1 | Tomato | plasma membrane | 55.05 | 54.49 |
| GSMUA_Achr4P28240_001 | Banana | plasma membrane | 45.57 | 53.77 |
| TraesCS5B01G019600.1 | Wheat | mitochondrion, plasma membrane | 49.48 | 48.48 |
| TraesCS6B01G296500.2 | Wheat | plasma membrane | 49.9 | 45.57 |
| TraesCS5B01G316000.1 | Wheat | golgi, peroxisome, plasma membrane | 39.79 | 38.76 |
| TraesCS4B01G350000.1 | Wheat | golgi, peroxisome, plasma membrane | 39.59 | 38.4 |
| TraesCS5B01G533500.1 | Wheat | plasma membrane | 38.14 | 37.68 |
| TraesCS7B01G365600.1 | Wheat | golgi, plasma membrane, vacuole | 37.32 | 37.4 |
| TraesCS3B01G031700.1 | Wheat | plasma membrane | 37.32 | 35.77 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G079100.1 | EnsemblPlantsGene:TraesCS5B01G079100 | Gene3D:1.20.1740.10 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0022857 | GO:GO:0055085 | InterPro:AA/rel_permease1 |
| PANTHER:PTHR11785 | PANTHER:PTHR11785:SF338 | PFAM:PF13520 | PIRSF:PIRSF006060 | SEG:seg | TMHMM:TMhelix |
| MapMan:24.2.3.5.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:96488794..96490356
Molecular Weight (calculated)
51672.4 Da
IEP (calculated)
5.075
GRAVY (calculated)
0.586
Length
485 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGGGGEDVP APRRRPLTVL PLVALIFYDV SGGPFGIEDS VRAGGGALLP LLGFLILPVL WSLPEALITA ELASAFPTNA GYVAWVSAAF GPTVAFLVGF
101: SKWASGTLDN ALYPVLFLDY LRSSGLALAP PIRSLAVLGL TTALTYLNFR GLHLVGLSAL FLTAFSLSPF VALTVLAIPK IRPSRWLAVN PKAIDPRGYF
201: NSMFWNLNYW DKASTLAGEV DEPRKTFPKA VFGAVALVVG AYLIPLLAGT GALPSETAAE WTDGFFSEVG QRIGGPWLRV WIQAAAAMSN MGLFEAEMSS
301: DSFQLLGMAE MGMIPAIFAR RSRHGTPTYS ILCSATGVVV LSFMSFQEII ELLNFLYGLG MLAVFAAFVK LRFKDPDLPR PYRIPLGSVG AAVMCVPPVL
401: LIGTVMCLAS ATTIVVNIIV LAVGVAMYFG VERLKRSGLV EFLTPVPSDS FHGSSSDDDV EDVRAVLLPA AVPPAQEEEV ASKAE
101: SKWASGTLDN ALYPVLFLDY LRSSGLALAP PIRSLAVLGL TTALTYLNFR GLHLVGLSAL FLTAFSLSPF VALTVLAIPK IRPSRWLAVN PKAIDPRGYF
201: NSMFWNLNYW DKASTLAGEV DEPRKTFPKA VFGAVALVVG AYLIPLLAGT GALPSETAAE WTDGFFSEVG QRIGGPWLRV WIQAAAAMSN MGLFEAEMSS
301: DSFQLLGMAE MGMIPAIFAR RSRHGTPTYS ILCSATGVVV LSFMSFQEII ELLNFLYGLG MLAVFAAFVK LRFKDPDLPR PYRIPLGSVG AAVMCVPPVL
401: LIGTVMCLAS ATTIVVNIIV LAVGVAMYFG VERLKRSGLV EFLTPVPSDS FHGSSSDDDV EDVRAVLLPA AVPPAQEEEV ASKAE
001: MGEEETIVND ENSSKPKPSP KLTLLPLVFL IFYEVSGGPF GVEDSVKSGG GPLLALLGFL IFPLIWSIPE ALVTAELATS FPENGGYVVW ISSAFGPFWG
101: FQEGFWKWFS GVMDNALYPV LFLDYLKHSF PVLDHVAARV PALLVITFSL TYLNYRGLHI VGFSAVVLAV FSLCPFVVMA LLAVPNIRPK RWLFVDTQKI
201: NWRGYFNTMF WNLNYWDKAS TLAGEVDRPG KTFPKALFGA VLLVMGSYLI PLMAGTGALS SSTSGEWSDG YFAEVGMLIG GVWLKGWIQA AAAMSNLGLF
301: EAEMSSDAFQ LLGMSEIGML PAFFAQRSKY GTPTISILCS ATGVIFLSWM SFQEIIEFLN FLYALGMLLE FAAFVKLRIK KPDLHRPYRV PLNTFGVSML
401: CLPPSLLVIL VMVLAAPKTF LISGVIIVLG FCLYPFLTLV KEKQWARFIP EETRPVSGVS SESQLDEEHG DESAASLLP
101: FQEGFWKWFS GVMDNALYPV LFLDYLKHSF PVLDHVAARV PALLVITFSL TYLNYRGLHI VGFSAVVLAV FSLCPFVVMA LLAVPNIRPK RWLFVDTQKI
201: NWRGYFNTMF WNLNYWDKAS TLAGEVDRPG KTFPKALFGA VLLVMGSYLI PLMAGTGALS SSTSGEWSDG YFAEVGMLIG GVWLKGWIQA AAAMSNLGLF
301: EAEMSSDAFQ LLGMSEIGML PAFFAQRSKY GTPTISILCS ATGVIFLSWM SFQEIIEFLN FLYALGMLLE FAAFVKLRIK KPDLHRPYRV PLNTFGVSML
401: CLPPSLLVIL VMVLAAPKTF LISGVIIVLG FCLYPFLTLV KEKQWARFIP EETRPVSGVS SESQLDEEHG DESAASLLP
Arabidopsis Description
PUT5 [Source:UniProtKB/TrEMBL;Acc:A0A178VGC5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.