Factsheet for Os12t0580400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
golgi 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G079100.1	Wheat	golgi, plasma membrane, vacuole	82.86	84.74
TraesCS5D01G085800.1	Wheat	golgi, plasma membrane, vacuole	82.66	84.71
TraesCS5A01G073000.1	Wheat	golgi, plasma membrane, vacuole	82.66	84.54
EES16229	Sorghum	plasma membrane	82.46	83.3
Zm00001d030832_P001	Maize	plasma membrane	82.46	82.29
HORVU5Hr1G019110.1	Barley	plastid	80.65	72.2
GSMUA_Achr2P13450_001	Banana	plasma membrane	44.76	60.0
Bra038217.1-P	Field mustard	golgi, plasma membrane, vacuole	56.05	58.16
CDY42190	Canola	golgi, plasma membrane, vacuole	55.85	57.95
CDY69762	Canola	golgi, plasma membrane, vacuole	55.65	57.74
AT3G19553.1	Thale cress	plasma membrane	55.65	57.62
Bra022433.1-P	Field mustard	plasma membrane	55.24	57.2
CDX99215	Canola	plasma membrane	55.44	57.05
CDY46166	Canola	plasma membrane	54.84	56.78
VIT_03s0091g00600.t01	Wine grape	plasma membrane	56.45	55.56
KRH77938	Soybean	plasma membrane	53.83	55.28
GSMUA_Achr4P28240_001	Banana	plasma membrane	45.16	54.5
PGSC0003DMT400013939	Potato	plasma membrane	53.83	53.83
Solyc10g049640.1.1	Tomato	plasma membrane	52.02	52.65
Os02t0700500-01	Rice	cytosol, peroxisome, plasma membrane	49.19	45.95
Os03t0576900-01	Rice	plastid	46.98	42.36
Os03t0375966-00	Rice	cytosol, golgi, peroxisome	25.0	39.74
Os03t0374900-00	Rice	peroxisome, plasma membrane, vacuole	25.2	37.88
Os03t0375900-01	Rice	plasma membrane	15.32	36.72
Os03t0375300-02	Rice	nucleus	28.83	26.14

Protein Annotations

Gene3D:1.20.1740.10	MapMan:24.2.3.5.1	EntrezGene:4352634	UniProt:A0A0N7KU97	InterPro:AA/rel_permease1	ProteinID:BAT17810.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887
GO:GO:0006810	GO:GO:0008150	GO:GO:0015203	GO:GO:0015297	GO:GO:0015846	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	GO:GO:1902047	EnsemblPlantsGene:Os12g0580400	EnsemblPlants:Os12t0580400-01
PFAM:PF13520	PIRSF:PIRSF006060	PANTHER:PTHR11785	PANTHER:PTHR11785:SF338	TMHMM:TMhelix	UniParc:UPI000393BA59
RefSeq:XP_015618171.1	SEG:seg	:	:	:	:

Description

POLYAMINE UPTAKE TRANSPORTER 2Similar to neutral amino acid transport protein. (Os12t0580400-01)

Coordinates

chr12:+:24037631..24039592

Molecular Weight (calculated)

51828.1 Da

IEP (calculated)

5.060

GRAVY (calculated)

0.601

Length

496 amino acids

Sequence
(BLAST)

001: MTGACEAAPA RRRGLTVLPL VALIFYDVSG GPFGIEDSVR AGGGALLPIL GFLVLPVLWS LPEALVTAEL ASAFPTNAGY VAWVSAAFGP AAAFLVGFSK
101: WASGTLDNAL YPVLFLDYLR SGGGLVLSPP ARSLAVLALT AALTYLNFRG LHLVGLSALA LTAFSLSPFV ALAVLAAPKI RPSRWLAVNV AAVEPRAYFN
201: SMFWNLNYWD KASTLAGEVE EPRKTFPKAV FGAVGLVVGA YLIPLLAGTG ALPSETAGEW TDGFFSVVGD RIGGPWLRVW IQAAAAMSNM GLFEAEMSGD
301: SFQLLGMAEM GMIPAIFARR SRHGTPTYSI LCSATGVVIL SFMSFQEIVE FLNFLYGLGM LAVFAAFVKL RVKDPDLPRP YRIPVGAAGA AAMCVPPVVL
401: ITTVMCLASA RTLVVSAAVA VAGVAMYYGV EHMKATGCVE FLTPVPPDSL RGSSSSSSSS AASDNGGDDD VEDVCALLLA AGEHAGEGVS VSKENY

Best Arabidopsis Sequence Match ( AT3G19553.1 )
(BLAST)

001: MGEEETIVND ENSSKPKPSP KLTLLPLVFL IFYEVSGGPF GVEDSVKSGG GPLLALLGFL IFPLIWSIPE ALVTAELATS FPENGGYVVW ISSAFGPFWG
101: FQEGFWKWFS GVMDNALYPV LFLDYLKHSF PVLDHVAARV PALLVITFSL TYLNYRGLHI VGFSAVVLAV FSLCPFVVMA LLAVPNIRPK RWLFVDTQKI
201: NWRGYFNTMF WNLNYWDKAS TLAGEVDRPG KTFPKALFGA VLLVMGSYLI PLMAGTGALS SSTSGEWSDG YFAEVGMLIG GVWLKGWIQA AAAMSNLGLF
301: EAEMSSDAFQ LLGMSEIGML PAFFAQRSKY GTPTISILCS ATGVIFLSWM SFQEIIEFLN FLYALGMLLE FAAFVKLRIK KPDLHRPYRV PLNTFGVSML
401: CLPPSLLVIL VMVLAAPKTF LISGVIIVLG FCLYPFLTLV KEKQWARFIP EETRPVSGVS SESQLDEEHG DESAASLLP

Arabidopsis Description

PUT5 [Source:UniProtKB/TrEMBL;Acc:A0A178VGC5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.