Factsheet for Os03t0374900-00

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, plasma membrane

Predictor Summary:

nucleus 1
vacuole 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G047000.1	Wheat	plasma membrane	66.36	72.28
TraesCSU01G202300.1	Wheat	plasma membrane	66.36	72.28
Os03t0375966-00	Rice	cytosol, golgi, peroxisome	57.58	60.9
Os03t0375300-02	Rice	nucleus	89.7	54.11
CDX75722	Canola	plasma membrane	41.52	50.74
HORVU3Hr1G005120.1	Barley	cytosol	31.82	50.72
HORVU3Hr1G005010.3	Barley	vacuole	36.67	50.21
TraesCS5D01G321300.1	Wheat	golgi, peroxisome, plasma membrane	74.24	49.2
TraesCS5B01G316000.1	Wheat	golgi, peroxisome, plasma membrane	73.64	48.8
KXG39283	Sorghum	plasma membrane	75.45	47.79
TraesCS5A01G315000.1	Wheat	golgi, peroxisome, plasma membrane	71.82	47.59
OQU92528	Sorghum	plasma membrane	70.3	46.96
TraesCS3A01G030900.1	Wheat	peroxisome, plasma membrane, vacuole	68.18	46.78
Zm00001d029314_P001	Maize	plasma membrane	67.27	46.25
TraesCS3B01G031700.1	Wheat	plasma membrane	69.39	45.26
TraesCS4B01G350000.1	Wheat	golgi, peroxisome, plasma membrane	68.18	45.0
TraesCS4D01G344800.1	Wheat	plasma membrane	68.48	44.58
HORVU4Hr1G085290.4	Barley	golgi, peroxisome, plasma membrane	68.48	44.58
KRH72395	Soybean	plasma membrane	49.09	34.47
KRH16786	Soybean	plasma membrane	49.09	33.68
PGSC0003DMT400082048	Potato	plasma membrane	48.18	33.62
VIT_06s0004g00790.t01	Wine grape	plasma membrane	47.88	33.26
Solyc01g005920.2.1	Tomato	plasma membrane	47.88	33.26
PGSC0003DMT400028298	Potato	mitochondrion, plasma membrane	46.97	32.98
Solyc01g034080.1.1	Tomato	plasma membrane	46.97	32.98
CDX75721	Canola	plasma membrane	47.58	32.91
Bra001514.1-P	Field mustard	plasma membrane	47.58	32.91
CDX82530	Canola	plasma membrane	47.27	32.7
AT3G13620.1	Thale cress	plasma membrane	46.97	32.43
CDY23626	Canola	plasma membrane	46.67	32.42
Bra027411.1-P	Field mustard	plasma membrane	46.67	32.29
CDX97502	Canola	plasma membrane	46.67	32.29
VIT_06s0004g00800.t01	Wine grape	plasma membrane	46.67	31.88
PGSC0003DMT400082047	Potato	plasma membrane	45.76	31.59
Zm00001d029318_P001	Maize	plasma membrane	28.48	31.13
KRH42817	Soybean	plasma membrane	45.15	30.85
KRH58913	Soybean	plasma membrane	44.85	30.71
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	40.0	28.45
Os12t0580400-01	Rice	plasma membrane	37.88	25.2
Os02t0700500-01	Rice	cytosol, peroxisome, plasma membrane	39.39	24.48
Os03t0576900-01	Rice	plastid	40.0	24.0
KRH45451	Soybean	plasma membrane	3.33	5.07
Os03t0375900-01	Rice	plasma membrane	2.12	3.38
TraesCSU01G046900.1	Wheat	plasma membrane	0.3	0.67
TraesCS5D01G321500.1	Wheat	golgi, mitochondrion, plasma membrane, plastid, vacuole	0.3	0.52
TraesCS5D01G321700.1	Wheat	plasma membrane	0.3	0.52
TraesCS5A01G315600.1	Wheat	extracellular, plasma membrane, vacuole	0.0	0.0

Protein Annotations

Gene3D:1.20.1740.10	MapMan:24.2.3.5.1	InterPro:AA/rel_permease1	ProteinID:AAP46206.1	ProteinID:ABF96213.1	ProteinID:BAF12130.2
ProteinID:BAS84399.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0005887	GO:GO:0006810	GO:GO:0008150	GO:GO:0015203	GO:GO:0015297	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	GO:GO:1902047	EnsemblPlantsGene:Os03g0374900	EnsemblPlants:Os03t0374900-00
PFAM:PF13520	PIRSF:PIRSF006060	PANTHER:PTHR11785	PANTHER:PTHR11785:SF378	UniProt:Q7Y166	TMHMM:TMhelix
UniParc:UPI00001A2F01	SEG:seg	:	:	:	:

Description

OsLAT2Similar to cationic amino acid transporter. (Os03t0374900-00)

Coordinates

chr3:-:14784720..14785712

Molecular Weight (calculated)

35290.6 Da

IEP (calculated)

8.980

GRAVY (calculated)

0.241

Length

330 amino acids

Sequence
(BLAST)

001: MDQEIQLNQR PSQREQQQEE HGATAAMPPQ DDERQDHQAA AAVHGQGGGG GATAERHHRS KLTLLPLVFL IYFEVAGGPY GAERAVRAAG PLFALLGFLA
101: FPFAWGVPVS LVTAELAAAL PGNGGFVVWA DRAFGPLAGS LLGTWKYLSC VINLAAFPAL VADYLGRVAP AVAVPGSRAR TGTVLGMTVF LSFLNLTGLS
201: IVGWGAVALG FVSLAPFVLM TAMAAPRTRP RRWAARVKGR KRDWRLFFNT LFWNLNYWDS ASTMAGEVER PERTFPRALA VAVVLIAVSY LLPLMAAIGA
301: TDAPPETWEN GYLADAAGTW LSNSALSMAL

Best Arabidopsis Sequence Match ( AT1G31820.1 )
(BLAST)

001: MGDYNMNEFA YGNLYDDDDG DVGGSSKEGN NSIQKVSMLP LVFLIFYEVS GGPFGAEGSV NAAGPLLALL GFVIFPFIWC IPEALITAEM STMFPINGGF
101: VVWVSSALGT FWGFQVGWMK WLCGVIDNAL YPVLFLDYLK SAVPALATGL PRVASILILT LLLTYLNYRG LTIVGWTAVF MGVFSMLPFA VMSLVSIPQL
201: EPSRWLVMDL GNVNWNLYLN TLLWNLNYWD SVSTLAGEVA NPKKTLPKAL CYGVIFVALS NFLPLLSGTG AIPLDRELWT DGYLAEVAKA IGGGWLQLWV
301: QAAAATSNMG MFLAEMSSDS FQLLGMAELG ILPEIFAQRS RYGTPLLGIL FSASGVLLLS GLSFQEIIAA ENLLYCGGMI LEFIAFVRLR KKHPAASRPY
401: KIPVGTVGSI LICVPPIVLI CLVIVLSTIK VALVSFVMVV IGFLMKPCLN HMDGKKWVKF SVCSDLAEFQ KENLDCEESL LR

Arabidopsis Description

Probable polyamine transporter At1g31820 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.