Factsheet for Os03t0576900-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024516_P001	Maize	plasma membrane	80.55	89.86
EES13409	Sorghum	plasma membrane	80.18	89.45
TraesCS5A01G022700.1	Wheat	mitochondrion, plasma membrane	78.91	87.68
TraesCS5D01G028100.1	Wheat	plasma membrane	78.73	87.47
TraesCS5B01G019600.1	Wheat	mitochondrion, plasma membrane	78.0	86.67
HORVU5Hr1G006170.3	Barley	golgi, plasma membrane	79.09	86.31
GSMUA_Achr4P11590_001	Banana	plasma membrane	42.36	74.44
GSMUA_Achr9P23200_001	Banana	plasma membrane	42.0	74.28
KRH76400	Soybean	plasma membrane	63.27	71.6
Solyc08g078100.1.1	Tomato	plasma membrane	60.18	70.73
KRG90652	Soybean	plasma membrane	59.82	70.6
PGSC0003DMT400067464	Potato	plasma membrane	60.0	70.51
VIT_03s0038g02860.t01	Wine grape	plasma membrane	62.0	70.45
VIT_02s0033g01310.t01	Wine grape	plasma membrane	61.27	70.06
KRH07711	Soybean	plasma membrane	60.0	69.77
PGSC0003DMT400047497	Potato	plasma membrane	58.91	69.08
AT1G31830.1	Thale cress	golgi, mitochondrion, plasma membrane	61.27	68.08
CDY12285	Canola	golgi, peroxisome, plasma membrane, plastid	60.91	67.27
KRH39685	Soybean	cytosol, peroxisome, plasma membrane, plastid	63.09	67.25
Bra023210.1-P	Field mustard	golgi, peroxisome, plasma membrane, plastid	60.73	67.07
VIT_02s0033g01320.t01	Wine grape	plasma membrane	56.36	65.54
Solyc01g111800.2.1	Tomato	plasma membrane	54.55	65.08
CDY63076	Canola	endoplasmic reticulum, plasma membrane, vacuole	44.36	65.07
PGSC0003DMT400008784	Potato	plasma membrane	54.91	64.95
Solyc08g075710.2.1	Tomato	plastid	62.0	63.86
Os02t0700500-01	Rice	cytosol, peroxisome, plasma membrane	61.09	63.28
Solyc09g092420.1.1	Tomato	plasma membrane	32.55	62.81
AT5G05630.1	Thale cress	plasma membrane	55.64	62.45
Bra023209.1-P	Field mustard	plasma membrane	51.27	62.39
AT1G31820.1	Thale cress	plasma membrane	54.18	61.83
Solyc08g005540.1.1	Tomato	cytosol, peroxisome, plasma membrane	59.45	61.7
KRH36101	Soybean	plasma membrane	29.82	60.97
CDX70141	Canola	plasma membrane, plastid	53.64	60.57
CDX98852	Canola	plasma membrane, plastid	53.82	60.53
Bra009122.1-P	Field mustard	plasma membrane	53.45	59.88
CDY12286	Canola	plasma membrane	42.18	59.34
Os12t0580400-01	Rice	plasma membrane	42.36	46.98
Os03t0375966-00	Rice	cytosol, golgi, peroxisome	24.91	43.91
Os03t0374900-00	Rice	peroxisome, plasma membrane, vacuole	24.0	40.0
KRH57856	Soybean	cytosol	16.73	38.17
Os03t0375900-01	Rice	plasma membrane	12.36	32.85
Os03t0375300-02	Rice	nucleus	26.91	27.06

Protein Annotations

Gene3D:1.20.1740.10	MapMan:24.2.3.5.1	EntrezGene:4333307	InterPro:AA/rel_permease1	ProteinID:ABF97256.1	EMBL:AK071314
ProteinID:BAF12452.1	ProteinID:BAS85028.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0008150	GO:GO:0015179	GO:GO:0015297
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	GO:GO:1902475	EnsemblPlantsGene:Os03g0576900
EnsemblPlants:Os03t0576900-01	PFAM:PF13520	PIRSF:PIRSF006060	PANTHER:PTHR11785	PANTHER:PTHR11785:SF338	UniProt:Q10HT5
TMHMM:TMhelix	UniParc:UPI0000DB4E31	RefSeq:XP_015631888.1	SEG:seg	:	:

Description

POLYAMINE UPTAKE TRANSPORTER 3Amino acid/polyamine transporter I family protein. (Os03t0576900-01);Hypothetical conserved gene. (Os03t0576900-02);Similar to cDNA clone:001-047-G03, full insert sequence. (Os03t0576900-03);Similar to neutral amino acid transport protein. (Os03t0576900-04);Similar to cDNA clone:001-047-G03, full insert sequence. (Os03t0576900-05)

Coordinates

chr3:+:21091940..21096890

Molecular Weight (calculated)

60378.6 Da

IEP (calculated)

7.265

GRAVY (calculated)

0.551

Length

550 amino acids

Sequence
(BLAST)

001: MTNAWISPSV VALCPSPLPS SRLPGSVLSC WPDSRGIRRG AGEGTAGQTL RPARGFTVEK LRNTAITRAN SACLPMEDCV GIKYSSVNEG EERKGGHGVP
101: KVSIIPLIFL IFYEVSGGPF GIEDSVKAAG PLLAIAGFLL FALIWSVPEA LITAEMGTMF PENGGYVVWV SSALGPFWGF QQGWAKWLSG VIDNALYPVL
201: FLDYVKSSIP ALGGGLPRTL AVLILTVALT YMNYRGLTIV GWVAVFLGVF SLLPFFVMGL IAIPRIEPSR WLEMDLGNVN WGLYLNTLFW NLNYWDSIST
301: LAGEVENPKR TLPRALSYAL VLVVGGYLYP LITCTAAVPV VREFWTDGYF SDVARILGGF WLHSWLQAAA ALSNMGNFVT EMSSDSYQLL GMAERGMLPE
401: FFAKRSRYGT PLIGIMFSAF GVVLLSWMSF QEIIAAENYL YCFGMILEFI AFIKLRVVHP NASRPYKIPL GTIGAVLMII PPTILIVVVM MLASFKVMVV
501: SIMAMLVGFV LQPALVYVEK RRWLKFSISA ELPDLPYSNV EEDSTIPLVC

Best Arabidopsis Sequence Match ( AT1G31830.1 )
(BLAST)

001: MQKRRIITVN PSASIEMSQY ENNEVPYSSV GADEVPSSPP KATDKIRKVS MLPLVFLIFY EVSGGPFGVE DSVNAAGPLL ALLGFVIFPF IWSIPEALIT
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR

Arabidopsis Description

Probable polyamine transporter At1g31830 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S5]
SUBAcon: [golgi,plasma membrane,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.