Factsheet for GSMUA_Achr4P11590_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 5
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P23200_001	Banana	plasma membrane	84.66	85.21
VIT_02s0033g01310.t01	Wine grape	plasma membrane	77.32	50.31
Solyc08g078100.1.1	Tomato	plasma membrane	74.12	49.57
PGSC0003DMT400067464	Potato	plasma membrane	73.16	48.93
VIT_02s0033g01320.t01	Wine grape	plasma membrane	72.52	47.99
VIT_03s0038g02860.t01	Wine grape	plasma membrane	74.12	47.93
Zm00001d024516_P001	Maize	plasma membrane	75.4	47.87
CDY63076	Canola	endoplasmic reticulum, plasma membrane, vacuole	57.19	47.73
EES13409	Sorghum	plasma membrane	74.76	47.46
KRG90652	Soybean	plasma membrane	70.29	47.21
PGSC0003DMT400047497	Potato	plasma membrane	70.29	46.91
KRH07711	Soybean	plasma membrane	70.61	46.72
TraesCS5B01G019600.1	Wheat	mitochondrion, plasma membrane	73.8	46.67
KRH76400	Soybean	plasma membrane	72.2	46.5
TraesCS5D01G028100.1	Wheat	plasma membrane	73.48	46.46
TraesCS5A01G022700.1	Wheat	mitochondrion, plasma membrane	73.16	46.26
HORVU5Hr1G006170.3	Barley	golgi, plasma membrane	74.12	46.03
AT1G31830.1	Thale cress	golgi, mitochondrion, plasma membrane	72.2	45.66
CDY12285	Canola	golgi, peroxisome, plasma membrane, plastid	71.57	44.98
Bra023210.1-P	Field mustard	golgi, peroxisome, plasma membrane, plastid	71.25	44.78
CDY12286	Canola	plasma membrane	55.91	44.76
GSMUA_Achr1P27820_001	Banana	plasma membrane	61.34	44.44
KRH39685	Soybean	cytosol, peroxisome, plasma membrane, plastid	72.52	43.99
AT1G31820.1	Thale cress	plasma membrane	66.13	42.95
AT5G05630.1	Thale cress	plasma membrane	66.77	42.65
PGSC0003DMT400008784	Potato	plasma membrane	63.26	42.58
Os03t0576900-01	Rice	plastid	74.44	42.36
Bra023209.1-P	Field mustard	plasma membrane	60.7	42.04
Solyc08g075710.2.1	Tomato	plastid	71.25	41.76
Solyc08g005540.1.1	Tomato	cytosol, peroxisome, plasma membrane	70.61	41.7
Solyc01g111800.2.1	Tomato	plasma membrane	61.02	41.43
CDX70141	Canola	plasma membrane, plastid	64.22	41.27
Bra009122.1-P	Field mustard	plasma membrane	64.54	41.14
CDX98852	Canola	plasma membrane, plastid	63.26	40.49
GSMUA_Achr4P28240_001	Banana	plasma membrane	45.69	34.79
KRH36101	Soybean	plasma membrane	27.48	31.97
GSMUA_Achr2P13450_001	Banana	plasma membrane	35.14	29.73
Solyc09g092420.1.1	Tomato	plasma membrane	22.68	24.91
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	29.71	20.04
KRH57856	Soybean	cytosol	8.31	10.79

Protein Annotations

Gene3D:1.20.1740.10	MapMan:24.2.3.5.1	InterPro:AA/rel_permease1	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr4G11590_001	EnsemblPlants:GSMUA_Achr4P11590_001	EnsemblPlants:GSMUA_Achr4T11590_001	UniProt:M0SN24
PFAM:PF13520	PANTHER:PTHR11785	PANTHER:PTHR11785:SF338	TMHMM:TMhelix	UniParc:UPI000294B01B	SEG:seg

Description

amino acid permease family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G11590_001]

Coordinates

chr4:-:8347055..8348734

Molecular Weight (calculated)

34575.2 Da

IEP (calculated)

7.241

GRAVY (calculated)

0.661

Length

313 amino acids

Sequence
(BLAST)

001: MGEYHNPGNN FVDERAPPKL DNIRKVSVIP LVFLIFYEVS GGPFGIEDSV QAAGPLLAIL GFLIFPFIWS IPEALITAEM GTMFPENGGY VVWVSSALGP
101: FWGFQQGWMK WLSGVIDNAL YPVLFLDYLK SGVPALGGGL LRTLAVLILT VALTYMNYRG LTIFFGKRSR YGTPLVGILF SASGVLLLSW MSFQEIVAAE
201: NFLYCFGMIL EFVAFIKLRL IYPNAPRPYK IPLGTAGCIL MIIPPTILIC VVLALATLKV MVVSVTAMLI GFILQPCLKH VEKKRLLKFS VNSDLPDFRE
301: AQCENTVESS LID

Best Arabidopsis Sequence Match ( AT1G31830.1 )
(BLAST)

001: MQKRRIITVN PSASIEMSQY ENNEVPYSSV GADEVPSSPP KATDKIRKVS MLPLVFLIFY EVSGGPFGVE DSVNAAGPLL ALLGFVIFPF IWSIPEALIT
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR

Arabidopsis Description

Probable polyamine transporter At1g31830 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S5]
SUBAcon: [mitochondrion,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.