Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY63076 Canola endoplasmic reticulum, plasma membrane, vacuole 84.14 87.73
Bra023209.1-P Field mustard plasma membrane 98.47 85.18
AT1G31820.1 Thale cress plasma membrane 85.17 69.09
CDY12285 Canola golgi, peroxisome, plasma membrane, plastid 74.68 58.63
GSMUA_Achr4P11590_001 Banana plasma membrane 44.76 55.91
VIT_02s0033g01310.t01 Wine grape plasma membrane 68.03 55.3
PGSC0003DMT400067464 Potato plasma membrane 65.73 54.91
Solyc08g078100.1.1 Tomato plasma membrane 65.47 54.7
GSMUA_Achr9P23200_001 Banana plasma membrane 42.46 53.38
VIT_02s0033g01320.t01 Wine grape plasma membrane 63.94 52.85
PGSC0003DMT400047497 Potato plasma membrane 62.15 51.81
KRH07711 Soybean plasma membrane 62.66 51.8
KRH76400 Soybean plasma membrane 63.68 51.23
CDX98852 Canola plasma membrane, plastid 63.17 50.51
CDX70141 Canola plasma membrane, plastid 62.4 50.1
GSMUA_Achr1P27820_001 Banana plasma membrane 54.48 49.31
KRH39685 Soybean cytosol, peroxisome, plasma membrane, plastid 64.71 49.03
TraesCS5A01G022700.1 Wheat mitochondrion, plasma membrane 60.1 47.47
TraesCS5D01G028100.1 Wheat plasma membrane 60.1 47.47
TraesCS5B01G019600.1 Wheat mitochondrion, plasma membrane 59.85 47.27
Zm00001d024516_P001 Maize plasma membrane 58.82 46.65
HORVU5Hr1G006170.3 Barley golgi, plasma membrane 60.1 46.63
EES13409 Sorghum plasma membrane 58.57 46.45
Solyc08g075710.2.1 Tomato plastid 63.43 46.44
TraesCS6D01G245700.1 Wheat plasma membrane 58.31 45.78
Solyc08g005540.1.1 Tomato cytosol, peroxisome, plasma membrane 61.89 45.66
Os02t0700500-01 Rice cytosol, peroxisome, plasma membrane 60.36 44.44
Zm00001d017728_P001 Maize plasma membrane 58.82 43.81
CDY42190 Canola golgi, plasma membrane, vacuole 53.45 43.72
CDY46166 Canola plasma membrane 53.2 43.42
CDX99215 Canola plasma membrane 53.45 43.36
CDY69762 Canola golgi, plasma membrane, vacuole 52.69 43.1
TraesCS6A01G269200.2 Wheat plasma membrane 58.06 42.99
OQU85562 Sorghum peroxisome, plasma membrane, vacuole 59.08 42.94
TraesCS6B01G296500.2 Wheat plasma membrane 57.54 42.37
Os03t0576900-01 Rice plastid 59.34 42.18
CDX75722 Canola plasma membrane 28.39 41.11
HORVU6Hr1G068230.1 Barley plastid 56.78 38.61
CDY23626 Canola plasma membrane 43.73 36.0
CDX97502 Canola plasma membrane 43.48 35.64
CDX82530 Canola plasma membrane 43.22 35.43
CDX75721 Canola plasma membrane 43.22 35.43
Protein Annotations
Gene3D:1.20.1740.10MapMan:24.2.3.5.1GO:A0A078FGB4UniProt:A0A078FGB4InterPro:AA/rel_permease1EnsemblPlants:CDY12286
ProteinID:CDY12286ProteinID:CDY12286.1GO:GO:0003333GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0015171GO:GO:0016020GO:GO:0016021GO:GO:0022857
GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00061354001PFAM:PF13520PIRSF:PIRSF006060PANTHER:PTHR11785PANTHER:PTHR11785:SF338
TMHMM:TMhelixUniParc:UPI0004EDEB39SEG:seg:::
Description
BnaA09g24860DBnaA09g24860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FGB4]
Coordinates
chrLK032019:+:441084..442490
Molecular Weight (calculated)
42639.4 Da
IEP (calculated)
7.622
GRAVY (calculated)
0.745
Length
391 amino acids
Sequence
(BLAST)
001: MRDYNNSDVA SPKAATNSIK KVSMIPLVFL IFYEVSGGPF GAEGIVNAAG PLLALLGFII FPFIWCIPEA LITAEMSTMF PINGGFVVWV SSALGPFWGF
101: QVGWMKWLCG VIDNALYPVL FLDYLKSAIP VLSTGLPRVA SILILTLLLT YLNYRGLTIV GWTAVLMGVF TMLPFAVMNV NTLAGEVANP KQTLPRALCY
201: SVIFVTLSNF LPLLSGTGAI PLNRELWTDG YLAEVAGAIG GGWLRVWVQV AAATSNMGMF IAEMSSDSFQ LLGMAELASG NLLYCGGMVL EFVAFVRMRM
301: KYPAASRPYK IPAGTVGSVL ICVPPIVLIC LVVLLSTFKV AVVSFVMVMV GLLMKPCLDH MDRKRWVKFS VSCDVPEFQK ESQEMEESLL R
Best Arabidopsis Sequence Match ( AT1G31820.1 )
(BLAST)
001: MGDYNMNEFA YGNLYDDDDG DVGGSSKEGN NSIQKVSMLP LVFLIFYEVS GGPFGAEGSV NAAGPLLALL GFVIFPFIWC IPEALITAEM STMFPINGGF
101: VVWVSSALGT FWGFQVGWMK WLCGVIDNAL YPVLFLDYLK SAVPALATGL PRVASILILT LLLTYLNYRG LTIVGWTAVF MGVFSMLPFA VMSLVSIPQL
201: EPSRWLVMDL GNVNWNLYLN TLLWNLNYWD SVSTLAGEVA NPKKTLPKAL CYGVIFVALS NFLPLLSGTG AIPLDRELWT DGYLAEVAKA IGGGWLQLWV
301: QAAAATSNMG MFLAEMSSDS FQLLGMAELG ILPEIFAQRS RYGTPLLGIL FSASGVLLLS GLSFQEIIAA ENLLYCGGMI LEFIAFVRLR KKHPAASRPY
401: KIPVGTVGSI LICVPPIVLI CLVIVLSTIK VALVSFVMVV IGFLMKPCLN HMDGKKWVKF SVCSDLAEFQ KENLDCEESL LR
Arabidopsis Description
Probable polyamine transporter At1g31820 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.