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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • plasma membrane 2
  • mitochondrion 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plasma membrane, plastid, vacuole
iPSORT:plastid
MultiLoc:plasma membrane
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G245700.1 Wheat plasma membrane 91.15 97.19
TraesCS6A01G269200.2 Wheat plasma membrane 96.05 96.59
HORVU6Hr1G068230.1 Barley plastid 92.84 85.74
Os02t0700500-01 Rice cytosol, peroxisome, plasma membrane 80.04 80.04
OQU85562 Sorghum peroxisome, plasma membrane, vacuole 79.66 78.62
Zm00001d017728_P001 Maize plasma membrane 77.21 78.1
GSMUA_Achr1P27820_001 Banana plasma membrane 57.82 71.06
PGSC0003DMT400047497 Potato plasma membrane 61.77 69.94
Solyc08g078100.1.1 Tomato plasma membrane 61.39 69.66
VIT_02s0033g01310.t01 Wine grape plasma membrane 63.09 69.65
PGSC0003DMT400067464 Potato plasma membrane 61.21 69.44
KRH76400 Soybean plasma membrane 62.71 68.52
KRH07711 Soybean plasma membrane 60.83 68.29
KRG90652 Soybean plasma membrane 59.51 67.81
VIT_03s0038g02860.t01 Wine grape plasma membrane 60.83 66.74
CDY63076 Canola endoplasmic reticulum, plasma membrane, vacuole 46.14 65.33
TraesCS5B01G019600.1 Wheat mitochondrion, plasma membrane 60.83 65.25
Bra023210.1-P Field mustard golgi, peroxisome, plasma membrane, plastid 60.64 64.66
CDY12285 Canola golgi, peroxisome, plasma membrane, plastid 60.64 64.66
KRH39685 Soybean cytosol, peroxisome, plasma membrane, plastid 62.71 64.53
VIT_02s0033g01320.t01 Wine grape plasma membrane 57.25 64.27
AT1G31830.1 Thale cress golgi, mitochondrion, plasma membrane 59.51 63.84
Solyc08g005540.1.1 Tomato cytosol, peroxisome, plasma membrane 63.47 63.58
PGSC0003DMT400008784 Potato plasma membrane 55.56 63.44
Solyc01g111800.2.1 Tomato plasma membrane 54.43 62.69
AT5G05630.1 Thale cress plasma membrane 57.82 62.65
Solyc08g075710.2.1 Tomato plastid 62.52 62.17
Solyc09g092420.1.1 Tomato plasma membrane 33.33 62.11
CDX70141 Canola plasma membrane, plastid 56.87 62.01
CDX98852 Canola plasma membrane, plastid 56.87 61.76
AT1G31820.1 Thale cress plasma membrane 55.56 61.2
Bra009122.1-P Field mustard plasma membrane 56.12 60.69
KRH36101 Soybean plasma membrane 30.7 60.59
Bra023209.1-P Field mustard plasma membrane 51.04 59.96
CDY12286 Canola plasma membrane 42.37 57.54
TraesCS5B01G079100.1 Wheat golgi, plasma membrane, vacuole 45.57 49.9
TraesCS5B01G533500.1 Wheat plasma membrane 38.42 41.55
TraesCS7B01G365600.1 Wheat golgi, plasma membrane, vacuole 37.85 41.53
TraesCS5B01G316000.1 Wheat golgi, peroxisome, plasma membrane 38.04 40.56
TraesCS4B01G350000.1 Wheat golgi, peroxisome, plasma membrane 37.48 39.8
TraesCS3B01G031700.1 Wheat plasma membrane 36.53 38.34
KRH57856 Soybean cytosol 17.33 38.17
Protein Annotations
EnsemblPlants:TraesCS6B01G296500.2EnsemblPlantsGene:TraesCS6B01G296500Gene3D:1.20.1740.10GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0015203GO:GO:0015846GO:GO:0016020GO:GO:0022857
GO:GO:0055085InterPro:AA/rel_permease1PANTHER:PTHR11785PANTHER:PTHR11785:SF434PFAM:PF13520PIRSF:PIRSF006060
SEG:segTMHMM:TMhelixMapMan:24.2.3.5.1:::
Description
No Description!
Coordinates
chr6B:-:532195384..532197622
Molecular Weight (calculated)
55990.8 Da
IEP (calculated)
4.785
GRAVY (calculated)
0.579
Length
531 amino acids
Sequence
(BLAST)
001: MGSVGPPGVA LSSLPPPPPP PVAAAVAAGA GGSADGGQEQ KPAQNGGPAA GAAPAMGEEG AEYQGLPGGA GAGAAPAPSP ASLSIVPLIF IIFYEVSGGP
101: FGIEDSVGAA GPLLAIAGFL ALPLIWSVPE ALITAELGTM FPENSGYVVW VASALGPYWG FQQGWMKWLS GLIDNALYPV LFLDYLKSGV PALGGGALRT
201: GAVLGLTALL TLLNYRGLTV VGWAAICLGV FSLLPFLVMG FISIPKLRPA RWLEVDLHTV DWNLYLNTLF WNLNYWDSIS TLSGEIRNPA KTLPKALFYA
301: VIFVVVGYLY PLLTGTGAVP LDREQWTDGY FADIAKLLSG AWLMWWMQAA AAMSNMGMFV AEMSSDSYQL LGMAERGMLP AFFATRSRYG TPPVGILFSA
401: SGVLLLSTMS FQEIVAAENF LYCFGMLLEF LSFVLLRVRR PDAPRPYRVP LGTAGCVAML VPATALIVAV LALSTLKVAL VSLGAVAVGL VLQPVLKFVE
501: KKRWLRFSVN SDLPGIDVNH QPAAPDEPLI V
Best Arabidopsis Sequence Match ( AT1G31820.1 )
(BLAST)
001: MGDYNMNEFA YGNLYDDDDG DVGGSSKEGN NSIQKVSMLP LVFLIFYEVS GGPFGAEGSV NAAGPLLALL GFVIFPFIWC IPEALITAEM STMFPINGGF
101: VVWVSSALGT FWGFQVGWMK WLCGVIDNAL YPVLFLDYLK SAVPALATGL PRVASILILT LLLTYLNYRG LTIVGWTAVF MGVFSMLPFA VMSLVSIPQL
201: EPSRWLVMDL GNVNWNLYLN TLLWNLNYWD SVSTLAGEVA NPKKTLPKAL CYGVIFVALS NFLPLLSGTG AIPLDRELWT DGYLAEVAKA IGGGWLQLWV
301: QAAAATSNMG MFLAEMSSDS FQLLGMAELG ILPEIFAQRS RYGTPLLGIL FSASGVLLLS GLSFQEIIAA ENLLYCGGMI LEFIAFVRLR KKHPAASRPY
401: KIPVGTVGSI LICVPPIVLI CLVIVLSTIK VALVSFVMVV IGFLMKPCLN HMDGKKWVKF SVCSDLAEFQ KENLDCEESL LR
Arabidopsis Description
Probable polyamine transporter At1g31820 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.