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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 5
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc08g005540.1.1 Tomato cytosol, peroxisome, plasma membrane 96.38 85.28
PGSC0003DMT400067464 Potato plasma membrane 84.22 84.4
KRH07711 Soybean plasma membrane 76.33 75.69
KRH76400 Soybean plasma membrane 78.25 75.51
VIT_02s0033g01310.t01 Wine grape plasma membrane 77.4 75.47
VIT_02s0033g01320.t01 Wine grape plasma membrane 72.71 72.09
GSMUA_Achr4P11590_001 Banana plasma membrane 46.91 70.29
KRH39685 Soybean cytosol, peroxisome, plasma membrane, plastid 77.19 70.16
GSMUA_Achr9P23200_001 Banana plasma membrane 46.48 70.1
CDY12285 Canola golgi, peroxisome, plasma membrane, plastid 73.56 69.28
Bra023210.1-P Field mustard golgi, peroxisome, plasma membrane, plastid 73.35 69.08
AT1G31830.1 Thale cress golgi, mitochondrion, plasma membrane 72.71 68.89
CDY63076 Canola endoplasmic reticulum, plasma membrane, vacuole 54.58 68.27
PGSC0003DMT400008784 Potato plasma membrane 67.38 67.96
GSMUA_Achr1P27820_001 Banana plasma membrane 62.47 67.82
AT5G05630.1 Thale cress plasma membrane 69.72 66.73
Zm00001d024516_P001 Maize plasma membrane 70.15 66.73
TraesCS6D01G245700.1 Wheat plasma membrane 70.79 66.67
EES13409 Sorghum plasma membrane 69.94 66.53
AT1G31820.1 Thale cress plasma membrane 67.59 65.77
TraesCS5A01G022700.1 Wheat mitochondrion, plasma membrane 69.08 65.45
TraesCS5B01G019600.1 Wheat mitochondrion, plasma membrane 68.87 65.25
CDX98852 Canola plasma membrane, plastid 68.02 65.24
CDX70141 Canola plasma membrane, plastid 67.59 65.09
Bra023209.1-P Field mustard plasma membrane 62.47 64.82
Zm00001d017728_P001 Maize plasma membrane 72.49 64.76
TraesCS5D01G028100.1 Wheat plasma membrane 68.23 64.65
HORVU5Hr1G006170.3 Barley golgi, plasma membrane 69.08 64.29
Bra009122.1-P Field mustard plasma membrane 67.16 64.15
Os02t0700500-01 Rice cytosol, peroxisome, plasma membrane 71.43 63.09
OQU85562 Sorghum peroxisome, plasma membrane, vacuole 72.28 63.01
TraesCS6A01G269200.2 Wheat plasma membrane 70.79 62.88
CDY12286 Canola plasma membrane 51.81 62.15
TraesCS6B01G296500.2 Wheat plasma membrane 69.94 61.77
Os03t0576900-01 Rice plastid 69.08 58.91
HORVU6Hr1G068230.1 Barley plastid 70.58 57.57
PGSC0003DMT400013939 Potato plasma membrane 53.73 50.81
PGSC0003DMT400028298 Potato mitochondrion, plasma membrane 46.27 46.17
PGSC0003DMT400082048 Potato plasma membrane 45.42 45.03
PGSC0003DMT400082047 Potato plasma membrane 45.2 44.35
Protein Annotations
Gene3D:1.20.1740.10EntrezGene:102602998MapMan:24.2.3.5.1InterPro:AA/rel_permease1GO:GO:0003333GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015171GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085UniProt:M1BKV5PFAM:PF13520EnsemblPlantsGene:PGSC0003DMG400018459
PGSC:PGSC0003DMG400018459EnsemblPlants:PGSC0003DMT400047497PIRSF:PIRSF006060PANTHER:PTHR11785PANTHER:PTHR11785:SF338TMHMM:TMhelix
UniParc:UPI0002964337RefSeq:XP_006361235.1::::
Description
Neutral amino acid transport protein [Source:PGSC_GENE;Acc:PGSC0003DMG400018459]
Coordinates
chr8:+:3701881..3707191
Molecular Weight (calculated)
51757.4 Da
IEP (calculated)
7.493
GRAVY (calculated)
0.645
Length
469 amino acids
Sequence
(BLAST)
001: MGECNNAEYI EINEVVSSSR ANNDGKLSLL PLVFLIFYEV SGGPFGVEDT VQAAGPLLAL VGFLVFPIIW SVPEALITAE LGTMFPENSG YVVWVSSALG
101: PYWGFQQGWV KWLSGVIDNA LYPVLFLDYL KSGVPALGGG LPRVIAVKGI TLVLTYMNYR GLTIVGWVAV LLGILSILPF VVMGLISIPK LRPTRWLVMD
201: VHSVDWNLYL NTLFWNLNYW DSISTLVGEV HNPKKTLPKA LFYAVILVVL SYFFPLLVGT GAVPLERDLW TDGYFSDIAK ILGGVWLRWW IQGAAALSNM
301: GTFVAEMSSD SFQLLGMAER GMLPEFFAKR SRHGTPLVGI LLSASGVLLL SWMSFQEIIA AENFLYCFGM ILEFIAFVRL RIKFPNASRP FKIPGGTIGA
401: ILLCMPPTIL VCVVLAFSTV KVMIISLAAV AIGLVMQPCL KHIEKKKWLK FSISPDLPDI HRDNGTLLH
Best Arabidopsis Sequence Match ( AT1G31830.1 )
(BLAST)
001: MQKRRIITVN PSASIEMSQY ENNEVPYSSV GADEVPSSPP KATDKIRKVS MLPLVFLIFY EVSGGPFGVE DSVNAAGPLL ALLGFVIFPF IWSIPEALIT
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR
Arabidopsis Description
Probable polyamine transporter At1g31830 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S5]
SUBAcon: [golgi,plasma membrane,mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.