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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • golgi 1
  • mitochondrion 2
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, mitochondrion, plasma membrane
MultiLoc:golgi
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G022700.1 Wheat mitochondrion, plasma membrane 97.78 97.78
TraesCS5B01G019600.1 Wheat mitochondrion, plasma membrane 97.37 97.37
HORVU5Hr1G006170.3 Barley golgi, plasma membrane 95.96 94.25
EES13409 Sorghum plasma membrane 87.07 87.42
Zm00001d024516_P001 Maize plasma membrane 85.86 86.21
Os03t0576900-01 Rice plastid 87.47 78.73
GSMUA_Achr4P11590_001 Banana plasma membrane 46.46 73.48
GSMUA_Achr9P23200_001 Banana plasma membrane 45.86 72.99
VIT_03s0038g02860.t01 Wine grape plasma membrane 69.9 71.49
Solyc08g078100.1.1 Tomato plasma membrane 67.07 70.94
PGSC0003DMT400067464 Potato plasma membrane 66.87 70.73
VIT_02s0033g01310.t01 Wine grape plasma membrane 68.08 70.06
KRH76400 Soybean plasma membrane 67.88 69.14
KRG90652 Soybean plasma membrane 65.05 69.1
PGSC0003DMT400047497 Potato plasma membrane 64.65 68.23
KRH07711 Soybean plasma membrane 64.85 67.86
AT1G31830.1 Thale cress golgi, mitochondrion, plasma membrane 67.68 67.68
CDY12285 Canola golgi, peroxisome, plasma membrane, plastid 67.27 66.87
Bra023210.1-P Field mustard golgi, peroxisome, plasma membrane, plastid 67.07 66.67
Solyc01g111800.2.1 Tomato plasma membrane 61.41 65.94
PGSC0003DMT400008784 Potato plasma membrane 61.82 65.81
CDY63076 Canola endoplasmic reticulum, plasma membrane, vacuole 49.7 65.6
VIT_02s0033g01320.t01 Wine grape plasma membrane 62.42 65.33
TraesCS6D01G245700.1 Wheat plasma membrane 65.25 64.86
KRH39685 Soybean cytosol, peroxisome, plasma membrane, plastid 67.27 64.53
Solyc09g092420.1.1 Tomato plasma membrane 36.36 63.16
AT1G31820.1 Thale cress plasma membrane 61.21 62.86
AT5G05630.1 Thale cress plasma membrane 62.02 62.65
Bra023209.1-P Field mustard plasma membrane 56.97 62.39
Solyc08g075710.2.1 Tomato plastid 66.26 61.42
CDX98852 Canola plasma membrane, plastid 60.2 60.94
Solyc08g005540.1.1 Tomato cytosol, peroxisome, plasma membrane 64.65 60.38
CDX70141 Canola plasma membrane, plastid 59.39 60.37
CDY12286 Canola plasma membrane 47.47 60.1
KRH36101 Soybean plasma membrane 32.53 59.85
Bra009122.1-P Field mustard plasma membrane 59.19 59.67
TraesCS5D01G085800.1 Wheat golgi, plasma membrane, vacuole 48.69 49.79
TraesCS5D01G321300.1 Wheat golgi, peroxisome, plasma membrane 39.6 39.36
TraesCS7D01G452600.1 Wheat golgi, plasma membrane, vacuole 38.99 39.31
TraesCS4D01G344800.1 Wheat plasma membrane 39.39 38.46
KRH57856 Soybean cytosol 18.59 38.17
TraesCS5D01G531700.1 Wheat mitochondrion, plasma membrane 38.79 36.78
TraesCS5D01G321500.1 Wheat golgi, mitochondrion, plasma membrane, plastid, vacuole 11.11 28.65
TraesCS5D01G321700.1 Wheat plasma membrane 10.91 28.12
Protein Annotations
EnsemblPlants:TraesCS5D01G028100.1EnsemblPlantsGene:TraesCS5D01G028100Gene3D:1.20.1740.10GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0022857GO:GO:0055085InterPro:AA/rel_permease1
PANTHER:PTHR11785PANTHER:PTHR11785:SF338PFAM:PF13520PIRSF:PIRSF006060SEG:segTMHMM:TMhelix
MapMan:24.2.3.5.1:::::
Description
No Description!
Coordinates
chr5D:-:26790638..26792374
Molecular Weight (calculated)
54813.6 Da
IEP (calculated)
5.456
GRAVY (calculated)
0.571
Length
495 amino acids
Sequence
(BLAST)
001: MILRSTAVTR ANSAFLHMED RVDFKYDGVN NESKERKGGH GIPKVSMVPL VFLIFYEVSG GPFGIEDSVK AAGPLLAIVG FLLFALIWSI PEALITAEMG
101: TMFPENGGYV VWVSSALGPF WGFQQGWAKW LSGVIDNALY PVLFLDYVKS SIPALGGGLP RTFAVLILTV ALTYMNYRGL TIVGWVAVFL GVFSLLPFFV
201: MGLIAIPHIE PSRWFEMDLD NVNWGLYLNT LFWNLNYWDS ISTLAGEVEN PKRTLPRALS YALVLVVGGY LYPLITCTAA LPVVRESWTD GYFSDIAKIL
301: GGFWLHSWIQ AAAALSNMGN FVTEMSSDSY QLLGMAERGM LPEFFGKRSR YGTPLIGILF SAFGVVLLSW MSFQEIIAAE NYLYCFGMIL EFIAFIKLRM
401: THPSTSRPFR IPLGTVGSVL MIIPPTILIV VVMVLASFKV MAVSILAVLV GFALQPALVY MEKKRWLRFS VREDLPDLLD PSAGAAEDET TPLVV
Best Arabidopsis Sequence Match ( AT1G31830.1 )
(BLAST)
001: MQKRRIITVN PSASIEMSQY ENNEVPYSSV GADEVPSSPP KATDKIRKVS MLPLVFLIFY EVSGGPFGVE DSVNAAGPLL ALLGFVIFPF IWSIPEALIT
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR
Arabidopsis Description
Probable polyamine transporter At1g31830 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S5]
SUBAcon: [mitochondrion,plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.