CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76400	Soybean	plasma membrane	84.57	82.3
PGSC0003DMT400067464	Potato	plasma membrane	78.86	79.7
Solyc08g078100.1.1	Tomato	plasma membrane	77.8	78.63
KRH39685	Soybean	cytosol, peroxisome, plasma membrane, plastid	83.3	76.36
PGSC0003DMT400047497	Potato	plasma membrane	75.69	76.33
VIT_02s0033g01310.t01	Wine grape	plasma membrane	74.84	73.6
KRG90652	Soybean	plasma membrane	71.46	72.53
GSMUA_Achr9P23200_001	Banana	plasma membrane	46.93	71.38
GSMUA_Achr4P11590_001	Banana	plasma membrane	46.72	70.61
VIT_02s0033g01320.t01	Wine grape	plasma membrane	70.19	70.19
AT1G31830.1	Thale cress	golgi, mitochondrion, plasma membrane	71.67	68.48
CDY63076	Canola	endoplasmic reticulum, plasma membrane, vacuole	54.12	68.27
Solyc08g005540.1.1	Tomato	cytosol, peroxisome, plasma membrane	76.32	68.11
GSMUA_Achr1P27820_001	Banana	plasma membrane	62.16	68.06
CDY12285	Canola	golgi, peroxisome, plasma membrane, plastid	71.46	67.87
Bra023210.1-P	Field mustard	golgi, peroxisome, plasma membrane, plastid	71.25	67.67
Zm00001d024516_P001	Maize	plasma membrane	69.34	66.53
EES13409	Sorghum	plasma membrane	69.13	66.33
Solyc08g075710.2.1	Tomato	plastid	74.84	66.29
AT5G05630.1	Thale cress	plasma membrane	68.08	65.71
TraesCS6D01G245700.1	Wheat	plasma membrane	69.13	65.66
TraesCS5D01G028100.1	Wheat	plasma membrane	67.86	64.85
CDX98852	Canola	plasma membrane, plastid	67.02	64.83
TraesCS5A01G022700.1	Wheat	mitochondrion, plasma membrane	67.65	64.65
Bra023209.1-P	Field mustard	plasma membrane	61.73	64.6
AT1G31820.1	Thale cress	plasma membrane	65.75	64.52
CDX70141	Canola	plasma membrane, plastid	66.17	64.27
TraesCS5B01G019600.1	Wheat	mitochondrion, plasma membrane	67.23	64.24
HORVU5Hr1G006170.3	Barley	golgi, plasma membrane	67.86	63.69
Bra009122.1-P	Field mustard	plasma membrane	65.75	63.34
KRH36101	Soybean	plasma membrane	35.94	63.2
CDY12286	Canola	plasma membrane	51.8	62.66
Zm00001d017728_P001	Maize	plasma membrane	68.71	61.9
TraesCS6A01G269200.2	Wheat	plasma membrane	68.92	61.74
Os02t0700500-01	Rice	cytosol, peroxisome, plasma membrane	69.13	61.58
TraesCS6B01G296500.2	Wheat	plasma membrane	68.29	60.83
OQU85562	Sorghum	peroxisome, plasma membrane, vacuole	68.71	60.41
Os03t0576900-01	Rice	plastid	69.77	60.0
HORVU6Hr1G068230.1	Barley	plastid	69.13	56.87
KRH77938	Soybean	plasma membrane	51.37	50.31
KRH58913	Soybean	plasma membrane	45.45	44.61
KRH42817	Soybean	plasma membrane	45.03	44.1
KRH57856	Soybean	cytosol	22.2	43.57
KRH72395	Soybean	plasma membrane	43.13	43.4
KRH16786	Soybean	plasma membrane	43.55	42.83
KRH45451	Soybean	plasma membrane	14.38	31.34

Protein Annotations

Gene3D:1.20.1740.10	EntrezGene:100810822	MapMan:24.2.3.5.1	InterPro:AA/rel_permease1	EMBL:ACUP02010081	EnsemblPlantsGene:GLYMA_16G105500
GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0005887	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0015179	GO:GO:0015297
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	GO:GO:1902475	UniProt:I1MMJ2
EnsemblPlants:KRH07711	ProteinID:KRH07711	ProteinID:KRH07711.1	PFAM:PF13520	PIRSF:PIRSF006060	PANTHER:PTHR11785
PANTHER:PTHR11785:SF338	TMHMM:TMhelix	UniParc:UPI000233E916	:	:	:

Description

hypothetical protein

Coordinates

chr16:-:21371036..21373068

Molecular Weight (calculated)

52508.9 Da

IEP (calculated)

4.921

GRAVY (calculated)

0.599

Length

473 amino acids

Sequence
(BLAST)

001: MGMFSGAEYV PIGNDELPSP RENHMRRVSV LPLVFLIFYE VSGGPFGVED TVHAAGPLLA LMGFLVFPFI WSVPEALITA EMSTMFPENS GYVVWVSSAL
101: GPYWGFQQGW MKWLSGVIDN ALYPVLFLDY LKSGIPALGG GVPRTVSTWA LTVALTCLNY RGLTIVGMVA VLLGVFSLLP FVVMGLLSIP DLKPSRWCVM
201: NLDDVDWNLY LNTLFWNLNY WDSISTLAGE VDNPRRTLPK ALFYALILVV LGYFFPLLIG TGAVPLNRDL WTDGYFSIIA EIVGGVWLRW WLQAAAAMSN
301: MGMFVAEMSS DSFQLLGMAE RGMLPEFFSK RSRFGTPLVG ILFSASGVIL LSWLSFQEIV AAENFLYCFG MILEFVAFIL LRIRHPNASR PYKVPGGTAG
401: AITICIPPTV LIFVVLAFSS NKVLVISLIA MAIGLVMQPC LKIMEERRWM KFSVRSELQD LDNNEESIHS FVG

Best Arabidopsis Sequence Match ( AT1G31830.1 )
(BLAST)

001: MQKRRIITVN PSASIEMSQY ENNEVPYSSV GADEVPSSPP KATDKIRKVS MLPLVFLIFY EVSGGPFGVE DSVNAAGPLL ALLGFVIFPF IWSIPEALIT
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR

Arabidopsis Description

Probable polyamine transporter At1g31830 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S5]
SUBAcon: [mitochondrion,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.