Factsheet for Bra023210.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plastid, plasma membrane

Predictor Summary:

nucleus 1
plastid 2
golgi 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12285	Canola	golgi, peroxisome, plasma membrane, plastid	99.8	99.8
AT1G31830.1	Thale cress	golgi, mitochondrion, plasma membrane	90.76	91.31
Bra023209.1-P	Field mustard	plasma membrane	69.68	76.77
Solyc08g078100.1.1	Tomato	plasma membrane	71.29	75.85
PGSC0003DMT400067464	Potato	plasma membrane	70.88	75.43
VIT_02s0033g01310.t01	Wine grape	plasma membrane	72.69	75.26
PGSC0003DMT400047497	Potato	plasma membrane	69.08	73.35
KRH76400	Soybean	plasma membrane	71.08	72.84
VIT_02s0033g01320.t01	Wine grape	plasma membrane	67.67	71.25
KRH07711	Soybean	plasma membrane	67.67	71.25
GSMUA_Achr4P11590_001	Banana	plasma membrane	44.78	71.25
GSMUA_Achr9P23200_001	Banana	plasma membrane	44.18	70.74
GSMUA_Achr1P27820_001	Banana	plasma membrane	61.04	70.37
KRH39685	Soybean	cytosol, peroxisome, plasma membrane, plastid	71.29	68.8
Zm00001d024516_P001	Maize	plasma membrane	67.47	68.15
EES13409	Sorghum	plasma membrane	67.27	67.95
TraesCS5A01G022700.1	Wheat	mitochondrion, plasma membrane	67.47	67.88
TraesCS5B01G019600.1	Wheat	mitochondrion, plasma membrane	67.27	67.68
TraesCS5D01G028100.1	Wheat	plasma membrane	66.67	67.07
Bra009122.1-P	Field mustard	plasma membrane	65.66	66.6
HORVU5Hr1G006170.3	Barley	golgi, plasma membrane	67.27	66.47
Solyc08g005540.1.1	Tomato	cytosol, peroxisome, plasma membrane	70.08	65.85
TraesCS6D01G245700.1	Wheat	plasma membrane	65.66	65.66
Solyc08g075710.2.1	Tomato	plastid	69.28	64.61
Zm00001d017728_P001	Maize	plasma membrane	66.47	63.05
OQU85562	Sorghum	peroxisome, plasma membrane, vacuole	67.47	62.45
Os02t0700500-01	Rice	cytosol, peroxisome, plasma membrane	66.27	62.15
TraesCS6A01G269200.2	Wheat	plasma membrane	65.46	61.74
Os03t0576900-01	Rice	plastid	67.07	60.73
TraesCS6B01G296500.2	Wheat	plasma membrane	64.66	60.64
Bra038217.1-P	Field mustard	golgi, plasma membrane, vacuole	54.22	56.49
Bra022433.1-P	Field mustard	plasma membrane	54.22	56.37
HORVU6Hr1G068230.1	Barley	plastid	65.06	56.35
Bra027411.1-P	Field mustard	plasma membrane	41.16	42.98
Bra001514.1-P	Field mustard	plasma membrane	40.36	42.14

Protein Annotations

Gene3D:1.20.1740.10	MapMan:24.2.3.5.1	InterPro:AA/rel_permease1	EnsemblPlantsGene:Bra023210	EnsemblPlants:Bra023210.1	EnsemblPlants:Bra023210.1-P
GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015171	GO:GO:0015203	GO:GO:0015846	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	GO:GO:1902047	UniProt:M4E359	PFAM:PF13520	PIRSF:PIRSF006060	PANTHER:PTHR11785
PANTHER:PTHR11785:SF338	TMHMM:TMhelix	UniParc:UPI0002542373	SEG:seg	:	:

Description

AT1G31830 (E=8e-258) | amino acid permease family protein

Coordinates

chrA09:+:20695340..20696836

Molecular Weight (calculated)

54883.7 Da

IEP (calculated)

5.772

GRAVY (calculated)

0.502

Length

498 amino acids

Sequence
(BLAST)

001: MQKRRIITVN PSSASVEMSH FSSNNEAPYS TVVDDDTPSP SPKAATDKIR KVSMLPLIFL IFYEVSGGPF GVEDSVNAAG PLLALLGFVI FPFIWSIPEA
101: LITAEMGTMF PENGGYVVWV SSALGPFWGF QQGWMKWLSG VIDNALYPVL FLDYLKSGVP ALGSGLPRVA AILVLTLMLT YLNYRGLTIV GWAAVAMGVF
201: SILPFAVMGL ISIPQLEPSR WLVMDLGNVN WNLYLNTLFW NLNYWDSIST LAGEVENPNQ TLPKALYYGV ILVALSYIFP LLTGTGAIPL ERELWTDGYF
301: SDVAKALGGA WLRWWVQAAA ATSNMGMFLA EMSSDSFQLL GMAERGMLPE FFAKRSRYGT PLLGILFSAS GVLLLSWLSF QEIVAAENLL YCVGMILEFI
401: AFVRMRMKHP AASRPYKIPI GTVGSILMCV PPTLLICAVV ALSSLKVAAV SFVMLIIGFV MHPCLNHMDR KKILKFSISS DLPDLQQETR ECQETLIR

Best Arabidopsis Sequence Match ( AT1G31830.1 )
(BLAST)

001: MQKRRIITVN PSASIEMSQY ENNEVPYSSV GADEVPSSPP KATDKIRKVS MLPLVFLIFY EVSGGPFGVE DSVNAAGPLL ALLGFVIFPF IWSIPEALIT
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR

Arabidopsis Description

Probable polyamine transporter At1g31830 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S5]
SUBAcon: [mitochondrion,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.