Factsheet for Bra023209.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12286	Canola	plasma membrane	85.18	98.47
AT1G31820.1	Thale cress	plasma membrane	84.96	79.67
Bra023210.1-P	Field mustard	golgi, peroxisome, plasma membrane, plastid	76.77	69.68
Solyc08g078100.1.1	Tomato	plasma membrane	67.48	65.17
PGSC0003DMT400067464	Potato	plasma membrane	67.48	65.17
VIT_02s0033g01310.t01	Wine grape	plasma membrane	69.25	65.07
PGSC0003DMT400047497	Potato	plasma membrane	64.82	62.47
VIT_02s0033g01320.t01	Wine grape	plasma membrane	65.27	62.37
KRH07711	Soybean	plasma membrane	64.6	61.73
KRH76400	Soybean	plasma membrane	65.71	61.11
GSMUA_Achr4P11590_001	Banana	plasma membrane	42.04	60.7
GSMUA_Achr1P27820_001	Banana	plasma membrane	57.52	60.19
Bra009122.1-P	Field mustard	plasma membrane	63.72	58.66
GSMUA_Achr9P23200_001	Banana	plasma membrane	39.82	57.88
KRH39685	Soybean	cytosol, peroxisome, plasma membrane, plastid	65.71	57.56
TraesCS5A01G022700.1	Wheat	mitochondrion, plasma membrane	62.61	57.17
TraesCS5D01G028100.1	Wheat	plasma membrane	62.39	56.97
TraesCS5B01G019600.1	Wheat	mitochondrion, plasma membrane	62.17	56.77
Zm00001d024516_P001	Maize	plasma membrane	61.5	56.39
HORVU5Hr1G006170.3	Barley	golgi, plasma membrane	62.61	56.15
EES13409	Sorghum	plasma membrane	61.06	55.98
Solyc08g075710.2.1	Tomato	plastid	65.71	55.62
TraesCS6D01G245700.1	Wheat	plasma membrane	60.84	55.22
Solyc08g005540.1.1	Tomato	cytosol, peroxisome, plasma membrane	64.6	55.09
Os02t0700500-01	Rice	cytosol, peroxisome, plasma membrane	62.61	53.3
Zm00001d017728_P001	Maize	plasma membrane	61.28	52.76
TraesCS6A01G269200.2	Wheat	plasma membrane	60.62	51.89
Bra038217.1-P	Field mustard	golgi, plasma membrane, vacuole	54.65	51.67
OQU85562	Sorghum	peroxisome, plasma membrane, vacuole	61.5	51.67
Bra022433.1-P	Field mustard	plasma membrane	54.42	51.36
Os03t0576900-01	Rice	plastid	62.39	51.27
TraesCS6B01G296500.2	Wheat	plasma membrane	59.96	51.04
HORVU6Hr1G068230.1	Barley	plastid	59.51	46.78
Bra027411.1-P	Field mustard	plasma membrane	44.69	42.35
Bra001514.1-P	Field mustard	plasma membrane	44.25	41.93

Protein Annotations

Gene3D:1.20.1740.10	MapMan:24.2.3.5.1	InterPro:AA/rel_permease1	EnsemblPlantsGene:Bra023209	EnsemblPlants:Bra023209.1	EnsemblPlants:Bra023209.1-P
GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015171	GO:GO:0015203	GO:GO:0015846	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	GO:GO:1902047	UniProt:M4E358	PFAM:PF13520	PIRSF:PIRSF006060	PANTHER:PTHR11785
PANTHER:PTHR11785:SF338	TMHMM:TMhelix	UniParc:UPI0002542374	SEG:seg	:	:

Description

AT1G31820 (E=5e-168) | amino acid permease family protein

Coordinates

chrA09:+:20697513..20698971

Molecular Weight (calculated)

49831.1 Da

IEP (calculated)

7.572

GRAVY (calculated)

0.664

Length

452 amino acids

Sequence
(BLAST)

001: MRDYNNSDVA SPKAATNSIK KVSMIPLVFL IFYEVSGGPF GAEGIVNAAG PLLALLGFII FPFIWCIPEA LITAEMSTMF PINGGFVVWV SSALGPFWGF
101: QVGWMKWLCG VIDNALYPVL FLDYLKSAIP VLSTGLPRVA SILILTLLLT YLNYRGLTIV GWTAVLMGVF TMLPFAVMSL ISIPNLQPWR WLVTDIGDVK
201: WNLYLNTLFW NLNYWDSVST LAGEVANPKQ TLPRALCYSV IFVTLSNFLP LLSGTGAIPL NRELWTDGYL AEVAGAIGGG WLRVWVQVAA ATSNMGMFIA
301: EMSSDSFQLL GMAELGMLPE VFAKRSRYGT PLLGIVCSAS ENLLYCGGMV LEFVAFVRMR MKYPAASRPY KIPAGTVGSV LICVPPIVLI CLVVVLSTFK
401: VAVVSFVMVM VGFVMKPCLD HMDRKRWVKF SVSCDVPEFQ KESQEMEESL LR

Best Arabidopsis Sequence Match ( AT1G31820.1 )
(BLAST)

001: MGDYNMNEFA YGNLYDDDDG DVGGSSKEGN NSIQKVSMLP LVFLIFYEVS GGPFGAEGSV NAAGPLLALL GFVIFPFIWC IPEALITAEM STMFPINGGF
101: VVWVSSALGT FWGFQVGWMK WLCGVIDNAL YPVLFLDYLK SAVPALATGL PRVASILILT LLLTYLNYRG LTIVGWTAVF MGVFSMLPFA VMSLVSIPQL
201: EPSRWLVMDL GNVNWNLYLN TLLWNLNYWD SVSTLAGEVA NPKKTLPKAL CYGVIFVALS NFLPLLSGTG AIPLDRELWT DGYLAEVAKA IGGGWLQLWV
301: QAAAATSNMG MFLAEMSSDS FQLLGMAELG ILPEIFAQRS RYGTPLLGIL FSASGVLLLS GLSFQEIIAA ENLLYCGGMI LEFIAFVRLR KKHPAASRPY
401: KIPVGTVGSI LICVPPIVLI CLVIVLSTIK VALVSFVMVV IGFLMKPCLN HMDGKKWVKF SVCSDLAEFQ KENLDCEESL LR

Arabidopsis Description

Probable polyamine transporter At1g31820 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.