Factsheet for Os02t0700500-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G245700.1	Wheat	plasma membrane	78.91	84.14
Zm00001d017728_P001	Maize	plasma membrane	81.92	82.86
TraesCS6A01G269200.2	Wheat	plasma membrane	81.73	82.2
OQU85562	Sorghum	peroxisome, plasma membrane, vacuole	82.11	81.04
TraesCS6B01G296500.2	Wheat	plasma membrane	80.04	80.04
HORVU6Hr1G068230.1	Barley	plastid	80.98	74.78
GSMUA_Achr1P27820_001	Banana	plasma membrane	58.38	71.76
Solyc08g078100.1.1	Tomato	plasma membrane	63.09	71.58
PGSC0003DMT400067464	Potato	plasma membrane	63.09	71.58
PGSC0003DMT400047497	Potato	plasma membrane	63.09	71.43
VIT_02s0033g01310.t01	Wine grape	plasma membrane	64.41	71.1
VIT_03s0038g02860.t01	Wine grape	plasma membrane	63.47	69.63
KRH76400	Soybean	plasma membrane	63.47	69.34
KRH07711	Soybean	plasma membrane	61.58	69.13
KRG90652	Soybean	plasma membrane	60.45	68.88
CDY63076	Canola	endoplasmic reticulum, plasma membrane, vacuole	47.83	67.73
Bra023210.1-P	Field mustard	golgi, peroxisome, plasma membrane, plastid	62.15	66.27
CDY12285	Canola	golgi, peroxisome, plasma membrane, plastid	61.96	66.06
KRH39685	Soybean	cytosol, peroxisome, plasma membrane, plastid	64.03	65.89
AT1G31830.1	Thale cress	golgi, mitochondrion, plasma membrane	61.02	65.45
VIT_02s0033g01320.t01	Wine grape	plasma membrane	58.19	65.33
Solyc01g111800.2.1	Tomato	plasma membrane	55.93	64.43
Solyc08g005540.1.1	Tomato	cytosol, peroxisome, plasma membrane	64.22	64.34
PGSC0003DMT400008784	Potato	plasma membrane	56.31	64.3
Solyc09g092420.1.1	Tomato	plasma membrane	33.9	63.16
AT1G31820.1	Thale cress	plasma membrane	57.25	63.07
Solyc08g075710.2.1	Tomato	plastid	63.28	62.92
Bra023209.1-P	Field mustard	plasma membrane	53.3	62.61
CDX70141	Canola	plasma membrane, plastid	57.06	62.22
AT5G05630.1	Thale cress	plasma membrane	57.25	62.04
CDX98852	Canola	plasma membrane, plastid	56.69	61.55
KRH36101	Soybean	plasma membrane	31.07	61.34
Os03t0576900-01	Rice	plastid	63.28	61.09
Bra009122.1-P	Field mustard	plasma membrane	56.31	60.9
CDY12286	Canola	plasma membrane	44.44	60.36
Os12t0580400-01	Rice	plasma membrane	45.95	49.19
Os03t0375966-00	Rice	cytosol, golgi, peroxisome	25.8	43.91
Os03t0374900-00	Rice	peroxisome, plasma membrane, vacuole	24.48	39.39
KRH57856	Soybean	cytosol	17.14	37.76
Os03t0375900-01	Rice	plasma membrane	14.12	36.23
Os03t0375300-02	Rice	nucleus	29.38	28.52

Protein Annotations

Gene3D:1.20.1740.10	MapMan:24.2.3.5.1	InterPro:AA/rel_permease1	EMBL:AK068055	ProteinID:BAD07518.1	ProteinID:BAD07889.1
ProteinID:BAF09754.1	ProteinID:BAS80462.1	ProteinID:EAZ24299.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0008150	GO:GO:0015179
GO:GO:0015203	GO:GO:0015293	GO:GO:0015297	GO:GO:0015846	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	GO:GO:1902047	GO:GO:1902475	EnsemblPlantsGene:Os02g0700500	EnsemblPlants:Os02t0700500-01
PFAM:PF13520	PIRSF:PIRSF006060	PANTHER:PTHR11785	PANTHER:PTHR11785:SF434	UniProt:Q6Z8D0	TMHMM:TMhelix
UniParc:UPI0000236704	SEG:seg	:	:	:	:

Description

POLYAMINE UPTAKE TRANSPORTER 1Polyamine uptake transporter, High-affinity spermidine transporter, Import of spermidine transported via phloem, Polyamine uptake (Os02t0700500-01)

Coordinates

chr2:-:28815466..28818691

Molecular Weight (calculated)

56629.7 Da

IEP (calculated)

5.447

GRAVY (calculated)

0.562

Length

531 amino acids

Sequence
(BLAST)

001: MADTGGRPEV SLATVRSPGH PAASTTAAAA ADLGHADTGQ EKPTVESAQP ANGAAPMGEC GTEYRGLPDG DAGGPMPSSA RTVSMIPLIF LIFYEVSGGP
101: FGIEDSVGAA GPLLAIIGFL VLPVIWSIPE ALITAELGAM FPENGGYVVW VASALGPYWG FQQGWMKWLS GVIDNALYPV LFLDYLKSGV PALGGGAPRA
201: FAVVGLTAVL TLLNYRGLTV VGWVAICLGV FSLLPFFVMG LIALPKLRPA RWLVIDLHNV DWNLYLNTLF WNLNYWDSIS TLAGEVKNPG KTLPKALFYA
301: VIFVVVAYLY PLLAGTGAVP LDRGQWTDGY FADIAKLLGG AWLMWWVQSA AALSNMGMFV AEMSSDSYQL LGMAERGMLP SFFAARSRYG TPLAGILFSA
401: SGVLLLSMMS FQEIVAAENF LYCFGMLLEF VAFILHRVRR PDAARPYRVP LGTAGCVAML VPPTALIAVV LALSTLKVAV VSLGAVAMGL VLQPALRFVE
501: KKRWLRFSVN PDLPEIGVIR PPAAPDEPLV P

Best Arabidopsis Sequence Match ( AT1G31830.1 )
(BLAST)

001: MQKRRIITVN PSASIEMSQY ENNEVPYSSV GADEVPSSPP KATDKIRKVS MLPLVFLIFY EVSGGPFGVE DSVNAAGPLL ALLGFVIFPF IWSIPEALIT
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR

Arabidopsis Description

Probable polyamine transporter At1g31830 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S5]
SUBAcon: [mitochondrion,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.