Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- plasma membrane 5
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400008784 | Potato | plasma membrane | 95.66 | 94.84 |
| Solyc09g092420.1.1 | Tomato | plasma membrane | 55.1 | 89.12 |
| VIT_03s0038g02860.t01 | Wine grape | plasma membrane | 70.72 | 67.36 |
| Solyc08g078100.1.1 | Tomato | plasma membrane | 67.68 | 66.67 |
| KRG90652 | Soybean | plasma membrane | 66.59 | 65.88 |
| GSMUA_Achr1P27820_001 | Banana | plasma membrane | 59.65 | 63.66 |
| TraesCS5A01G022700.1 | Wheat | mitochondrion, plasma membrane | 66.81 | 62.22 |
| TraesCS5B01G019600.1 | Wheat | mitochondrion, plasma membrane | 66.59 | 62.02 |
| EES13409 | Sorghum | plasma membrane | 65.94 | 61.66 |
| Zm00001d024516_P001 | Maize | plasma membrane | 65.73 | 61.46 |
| TraesCS5D01G028100.1 | Wheat | plasma membrane | 65.94 | 61.41 |
| HORVU5Hr1G006170.3 | Barley | golgi, plasma membrane | 67.03 | 61.31 |
| GSMUA_Achr4P11590_001 | Banana | plasma membrane | 41.43 | 61.02 |
| GSMUA_Achr9P23200_001 | Banana | plasma membrane | 39.91 | 59.16 |
| TraesCS6D01G245700.1 | Wheat | plasma membrane | 63.56 | 58.84 |
| Solyc08g005540.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 67.25 | 58.49 |
| KRH36101 | Soybean | plasma membrane | 34.06 | 58.36 |
| Solyc08g075710.2.1 | Tomato | plastid | 65.73 | 56.74 |
| Zm00001d017728_P001 | Maize | plasma membrane | 63.77 | 56.0 |
| Os02t0700500-01 | Rice | cytosol, peroxisome, plasma membrane | 64.43 | 55.93 |
| OQU85562 | Sorghum | peroxisome, plasma membrane, vacuole | 64.86 | 55.58 |
| TraesCS6A01G269200.2 | Wheat | plasma membrane | 63.34 | 55.3 |
| Os03t0576900-01 | Rice | plastid | 65.08 | 54.55 |
| TraesCS6B01G296500.2 | Wheat | plasma membrane | 62.69 | 54.43 |
| HORVU6Hr1G068230.1 | Barley | plastid | 62.91 | 50.43 |
| Solyc10g049640.1.1 | Tomato | plasma membrane | 52.93 | 49.8 |
| Solyc01g034080.1.1 | Tomato | plasma membrane | 41.0 | 40.21 |
| Solyc01g005920.2.1 | Tomato | plasma membrane | 41.21 | 40.0 |
| KRH57856 | Soybean | cytosol | 20.61 | 39.42 |
Protein Annotations
| Gene3D:1.20.1740.10 | MapMan:24.2.3.5.1 | InterPro:AA/rel_permease1 | GO:GO:0003333 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015171 | GO:GO:0015179 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 |
| GO:GO:0055085 | GO:GO:1902475 | UniProt:K4B442 | PFAM:PF13520 | PIRSF:PIRSF006060 | PANTHER:PTHR11785 |
| PANTHER:PTHR11785:SF434 | EnsemblPlantsGene:Solyc01g111800.2 | EnsemblPlants:Solyc01g111800.2.1 | TMHMM:TMhelix | UniParc:UPI00027678EB | : |
Description
No Description!
Coordinates
chr1:-:97973675..97975297
Molecular Weight (calculated)
51328.6 Da
IEP (calculated)
6.276
GRAVY (calculated)
0.709
Length
461 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAEKYSSLS RGANFTKLSF VPLTFLIFYG VSGGPFGVED TVRAAGPFLA LVGYLIFPIV WSIPESLITA ELSTMFPENG GYVVWVSKSF GPYWGFQLGW
101: VKWMSGVVDN ALYPVLFLDY IKSSVPALAN GLPRTIVIVA LVIALTYLNY RGLTIVAWVA TVLAIFTLLP FLIMGVIALP KLEPSRWFVM DLENVQWGLY
201: LNTLFWNLNY WDSVSTMAGE VEDPGKTIPK ALFYALPLVV SVYFFPLLFG TGAVPLHRDL WSDGYFSDIA KIIGGVWLRW WVQGASAVSN MGMFLAEMSG
301: DSYQLLGMAE RGMLPEFFAK RSHYGTPFIS ILFSASGVVL LSCLSFQEIV AAENFMNCFG MILEFLCFVK LRIKYPAASR PYRIPLGTIG SILICLPPTL
401: FLLVVIALCS FKVMIVSFLA ILVGLIMQPC LIYCDKKKWL SFSVSSDLVE LQTNYHQVVE A
101: VKWMSGVVDN ALYPVLFLDY IKSSVPALAN GLPRTIVIVA LVIALTYLNY RGLTIVAWVA TVLAIFTLLP FLIMGVIALP KLEPSRWFVM DLENVQWGLY
201: LNTLFWNLNY WDSVSTMAGE VEDPGKTIPK ALFYALPLVV SVYFFPLLFG TGAVPLHRDL WSDGYFSDIA KIIGGVWLRW WVQGASAVSN MGMFLAEMSG
301: DSYQLLGMAE RGMLPEFFAK RSHYGTPFIS ILFSASGVVL LSCLSFQEIV AAENFMNCFG MILEFLCFVK LRIKYPAASR PYRIPLGTIG SILICLPPTL
401: FLLVVIALCS FKVMIVSFLA ILVGLIMQPC LIYCDKKKWL SFSVSSDLVE LQTNYHQVVE A
001: MQKRRIITVN PSASIEMSQY ENNEVPYSSV GADEVPSSPP KATDKIRKVS MLPLVFLIFY EVSGGPFGVE DSVNAAGPLL ALLGFVIFPF IWSIPEALIT
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR
Arabidopsis Description
Probable polyamine transporter At1g31830 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S5]
SUBAcon: [mitochondrion,plasma membrane,golgi]
SUBAcon: [mitochondrion,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.