Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g111800.2.1 | Tomato | plasma membrane | 89.12 | 55.1 |
| PGSC0003DMT400008784 | Potato | plasma membrane | 88.42 | 54.19 |
| KRH36101 | Soybean | plasma membrane | 45.26 | 47.96 |
| VIT_03s0038g02860.t01 | Wine grape | plasma membrane | 69.82 | 41.12 |
| KRG90652 | Soybean | plasma membrane | 65.61 | 40.13 |
| Solyc08g078100.1.1 | Tomato | plasma membrane | 65.26 | 39.74 |
| GSMUA_Achr1P27820_001 | Banana | plasma membrane | 60.0 | 39.58 |
| Zm00001d024516_P001 | Maize | plasma membrane | 64.21 | 37.12 |
| EES13409 | Sorghum | plasma membrane | 64.21 | 37.12 |
| TraesCS5A01G022700.1 | Wheat | mitochondrion, plasma membrane | 64.21 | 36.97 |
| TraesCS5B01G019600.1 | Wheat | mitochondrion, plasma membrane | 63.51 | 36.57 |
| TraesCS5D01G028100.1 | Wheat | plasma membrane | 63.16 | 36.36 |
| HORVU5Hr1G006170.3 | Barley | golgi, plasma membrane | 64.21 | 36.31 |
| TraesCS6D01G245700.1 | Wheat | plasma membrane | 63.16 | 36.14 |
| Solyc08g075710.2.1 | Tomato | plastid | 65.26 | 34.83 |
| KRH57856 | Soybean | cytosol | 29.12 | 34.44 |
| Solyc08g005540.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 63.51 | 34.15 |
| Zm00001d017728_P001 | Maize | plasma membrane | 62.81 | 34.1 |
| TraesCS6A01G269200.2 | Wheat | plasma membrane | 63.16 | 34.09 |
| OQU85562 | Sorghum | peroxisome, plasma membrane, vacuole | 64.21 | 34.01 |
| Os02t0700500-01 | Rice | cytosol, peroxisome, plasma membrane | 63.16 | 33.9 |
| TraesCS6B01G296500.2 | Wheat | plasma membrane | 62.11 | 33.33 |
| Os03t0576900-01 | Rice | plastid | 62.81 | 32.55 |
| HORVU6Hr1G068230.1 | Barley | plastid | 63.16 | 31.3 |
| Solyc10g049640.1.1 | Tomato | plasma membrane | 48.77 | 28.37 |
| Solyc01g005920.2.1 | Tomato | plasma membrane | 40.0 | 24.0 |
| Solyc01g034080.1.1 | Tomato | plasma membrane | 38.95 | 23.62 |
| GSMUA_Achr4P11590_001 | Banana | plasma membrane | 24.91 | 22.68 |
| GSMUA_Achr9P23200_001 | Banana | plasma membrane | 23.86 | 21.86 |
Protein Annotations
| Gene3D:1.20.1740.10 | MapMan:24.2.3.5.1 | InterPro:AA/rel_permease1 | GO:GO:0003333 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015171 | GO:GO:0015179 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 |
| GO:GO:0055085 | GO:GO:1902475 | UniProt:K4CWR8 | PFAM:PF13520 | PANTHER:PTHR11785 | PANTHER:PTHR11785:SF434 |
| EnsemblPlantsGene:Solyc09g092420.1 | EnsemblPlants:Solyc09g092420.1.1 | TMHMM:TMhelix | UniParc:UPI000276BB8C | : | : |
Description
No Description!
Coordinates
chr9:-:71520932..71522717
Molecular Weight (calculated)
32006.6 Da
IEP (calculated)
8.923
GRAVY (calculated)
0.516
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MLANGLPRTI VIVALVIALT YLNYRGLTIV AWVATVLVIF TLLPFLIMGV IALPKLEPSR WFVVDLENVQ WGLYLNTLFW NLNYWDSVST MAGEVEDPGK
101: TIPKALFYAL PLVVSGYFLP LLFGTGAVPL HRDLWSDGYF SDIAKIIGGV WLRLWVQGAS AVSNMGMFLA EMSGDSYQLL GMAERGMLPD FFAKRWRYGT
201: PFISILFSAS GVVLLSCLGF QEIVAAENFM NCFAMILEFL SFVKLRIKYP AASRPYRIPL GSYFSSDKKD MQNRTSQHAK NLLHI
101: TIPKALFYAL PLVVSGYFLP LLFGTGAVPL HRDLWSDGYF SDIAKIIGGV WLRLWVQGAS AVSNMGMFLA EMSGDSYQLL GMAERGMLPD FFAKRWRYGT
201: PFISILFSAS GVVLLSCLGF QEIVAAENFM NCFAMILEFL SFVKLRIKYP AASRPYRIPL GSYFSSDKKD MQNRTSQHAK NLLHI
001: MGDYNMNEFA YGNLYDDDDG DVGGSSKEGN NSIQKVSMLP LVFLIFYEVS GGPFGAEGSV NAAGPLLALL GFVIFPFIWC IPEALITAEM STMFPINGGF
101: VVWVSSALGT FWGFQVGWMK WLCGVIDNAL YPVLFLDYLK SAVPALATGL PRVASILILT LLLTYLNYRG LTIVGWTAVF MGVFSMLPFA VMSLVSIPQL
201: EPSRWLVMDL GNVNWNLYLN TLLWNLNYWD SVSTLAGEVA NPKKTLPKAL CYGVIFVALS NFLPLLSGTG AIPLDRELWT DGYLAEVAKA IGGGWLQLWV
301: QAAAATSNMG MFLAEMSSDS FQLLGMAELG ILPEIFAQRS RYGTPLLGIL FSASGVLLLS GLSFQEIIAA ENLLYCGGMI LEFIAFVRLR KKHPAASRPY
401: KIPVGTVGSI LICVPPIVLI CLVIVLSTIK VALVSFVMVV IGFLMKPCLN HMDGKKWVKF SVCSDLAEFQ KENLDCEESL LR
101: VVWVSSALGT FWGFQVGWMK WLCGVIDNAL YPVLFLDYLK SAVPALATGL PRVASILILT LLLTYLNYRG LTIVGWTAVF MGVFSMLPFA VMSLVSIPQL
201: EPSRWLVMDL GNVNWNLYLN TLLWNLNYWD SVSTLAGEVA NPKKTLPKAL CYGVIFVALS NFLPLLSGTG AIPLDRELWT DGYLAEVAKA IGGGWLQLWV
301: QAAAATSNMG MFLAEMSSDS FQLLGMAELG ILPEIFAQRS RYGTPLLGIL FSASGVLLLS GLSFQEIIAA ENLLYCGGMI LEFIAFVRLR KKHPAASRPY
401: KIPVGTVGSI LICVPPIVLI CLVIVLSTIK VALVSFVMVV IGFLMKPCLN HMDGKKWVKF SVCSDLAEFQ KENLDCEESL LR
Arabidopsis Description
Probable polyamine transporter At1g31820 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.