CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 3
golgi 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024516_P001	Maize	plasma membrane	94.93	94.93
TraesCS5A01G022700.1	Wheat	mitochondrion, plasma membrane	88.03	87.68
TraesCS5D01G028100.1	Wheat	plasma membrane	87.42	87.07
TraesCS5B01G019600.1	Wheat	mitochondrion, plasma membrane	87.02	86.67
HORVU5Hr1G006170.3	Barley	golgi, plasma membrane	87.83	85.91
Os03t0576900-01	Rice	plastid	89.45	80.18
GSMUA_Achr4P11590_001	Banana	plasma membrane	47.46	74.76
GSMUA_Achr9P23200_001	Banana	plasma membrane	47.06	74.6
VIT_03s0038g02860.t01	Wine grape	plasma membrane	69.98	71.28
VIT_02s0033g01310.t01	Wine grape	plasma membrane	68.97	70.69
KRH76400	Soybean	plasma membrane	69.37	70.37
Solyc08g078100.1.1	Tomato	plasma membrane	66.53	70.09
PGSC0003DMT400047497	Potato	plasma membrane	66.53	69.94
PGSC0003DMT400067464	Potato	plasma membrane	66.33	69.87
KRH07711	Soybean	plasma membrane	66.33	69.13
KRG90652	Soybean	plasma membrane	65.31	69.1
AT1G31830.1	Thale cress	golgi, mitochondrion, plasma membrane	67.75	67.47
CDY12285	Canola	golgi, peroxisome, plasma membrane, plastid	68.15	67.47
Bra023210.1-P	Field mustard	golgi, peroxisome, plasma membrane, plastid	67.95	67.27
VIT_02s0033g01320.t01	Wine grape	plasma membrane	63.29	65.96
Solyc01g111800.2.1	Tomato	plasma membrane	61.66	65.94
KRH39685	Soybean	cytosol, peroxisome, plasma membrane, plastid	68.97	65.89
PGSC0003DMT400008784	Potato	plasma membrane	62.07	65.81
CDY63076	Canola	endoplasmic reticulum, plasma membrane, vacuole	49.29	64.8
Solyc09g092420.1.1	Tomato	plasma membrane	37.12	64.21
Solyc08g075710.2.1	Tomato	plastid	69.17	63.86
AT5G05630.1	Thale cress	plasma membrane	63.08	63.47
AT1G31820.1	Thale cress	plasma membrane	61.26	62.66
OQU85562	Sorghum	peroxisome, plasma membrane, vacuole	67.75	62.08
Solyc08g005540.1.1	Tomato	cytosol, peroxisome, plasma membrane	66.73	62.08
CDX70141	Canola	plasma membrane, plastid	60.85	61.6
CDX98852	Canola	plasma membrane, plastid	60.85	61.35
Bra023209.1-P	Field mustard	plasma membrane	55.98	61.06
KRH36101	Soybean	plasma membrane	33.06	60.59
Bra009122.1-P	Field mustard	plasma membrane	60.24	60.49
CDY12286	Canola	plasma membrane	46.45	58.57
EES16229	Sorghum	plasma membrane	48.88	49.08
EER92207	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	22.92	44.84
EER92206	Sorghum	plasma membrane	41.38	41.13
OQU92528	Sorghum	plasma membrane	39.35	39.27
KXG39283	Sorghum	plasma membrane	40.16	38.0
KRH57856	Soybean	cytosol	18.05	36.93

Protein Annotations

Gene3D:1.20.1740.10	MapMan:24.2.3.5.1	EntrezGene:8080865	InterPro:AA/rel_permease1	UniProt:C5YHF7	EnsemblPlants:EES13409
ProteinID:EES13409	ProteinID:EES13409.1	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171
GO:GO:0015179	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
GO:GO:1902475	PFAM:PF13520	PIRSF:PIRSF006060	PANTHER:PTHR11785	PANTHER:PTHR11785:SF338	EnsemblPlantsGene:SORBI_3007G053100
unigene:Sbi.4364	TMHMM:TMhelix	UniParc:UPI0001A8743F	RefSeq:XP_002443914.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:+:5393317..5400889

Molecular Weight (calculated)

54322.1 Da

IEP (calculated)

5.726

GRAVY (calculated)

0.590

Length

493 amino acids

Sequence
(BLAST)

001: MKLRNTAITR ANSAFFPMGD RVGVKYNSVN EGEERKGGHG IPKVSMVPLI FLIFYEVSGG PFGIEDSVKA AGPLLAIVGF LLFALIWSIP EALITAEMGT
101: MFPENGGYVV WVSSALGPFW GFQQGWAKWL SGVIDNALYP VLFLDYVKSS VPALGGGLPR TVAVLILTVA LTYMNYRGLT IVGWVAVFLG VFSLLPFFVM
201: GLIAIPRIEP SRWLEMDLGN VDWGLYLNTL FWNLNYWDSI STLAGEVENP KRTLPRALSY ALVLVVGGYL YPLITCTAAV PVVREYWSDG YFSDIARILG
301: GIWLHSWIQA AAALSNMGNF LTEMSSDSYQ LLGMAERGML PDFFAKRSHH GTPLIGILFS AFGVILLSWM SFQEIIAAEN YLYCFGMILE FIAFIKLRVT
401: HPNASRPYKI PLGTIGAVLM IIPPAVLIIV VMAIASYKVM AVSILAMVIG FVLQPCLGYV EKKRWLRFSI SADLPDLPDA QETAEDDAVP LVF

Best Arabidopsis Sequence Match ( AT1G31830.1 )
(BLAST)

001: MQKRRIITVN PSASIEMSQY ENNEVPYSSV GADEVPSSPP KATDKIRKVS MLPLVFLIFY EVSGGPFGVE DSVNAAGPLL ALLGFVIFPF IWSIPEALIT
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR

Arabidopsis Description

Probable polyamine transporter At1g31830 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S5]
SUBAcon: [mitochondrion,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.