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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d029318_P001 Maize plasma membrane 50.48 87.09
TraesCS5D01G321300.1 Wheat golgi, peroxisome, plasma membrane 76.97 80.52
TraesCS5B01G316000.1 Wheat golgi, peroxisome, plasma membrane 75.82 79.32
TraesCS5A01G315000.1 Wheat golgi, peroxisome, plasma membrane 74.86 78.31
OQU92528 Sorghum plasma membrane 72.17 76.11
Os03t0374900-00 Rice peroxisome, plasma membrane, vacuole 47.79 75.45
TraesCS3A01G030900.1 Wheat peroxisome, plasma membrane, vacuole 69.29 75.05
TraesCS4D01G344800.1 Wheat plasma membrane 71.78 73.77
TraesCS4B01G350000.1 Wheat golgi, peroxisome, plasma membrane 70.25 73.2
TraesCSU01G202300.1 Wheat plasma membrane 42.23 72.61
TraesCSU01G047000.1 Wheat plasma membrane 42.23 72.61
HORVU4Hr1G085290.4 Barley golgi, peroxisome, plasma membrane 69.87 71.79
TraesCS3B01G031700.1 Wheat plasma membrane 69.48 71.54
TraesCSU01G046900.1 Wheat plasma membrane 19.77 69.13
HORVU3Hr1G005010.3 Barley vacuole 30.13 65.15
TraesCS5A01G315600.1 Wheat extracellular, plasma membrane, vacuole 19.0 65.13
TraesCS5D01G321700.1 Wheat plasma membrane 23.99 65.1
TraesCS5D01G321500.1 Wheat golgi, mitochondrion, plasma membrane, plastid, vacuole 23.61 64.06
EER92207 Sorghum endoplasmic reticulum, plasma membrane, vacuole 29.75 61.51
EER92206 Sorghum plasma membrane 55.09 57.86
KRH72395 Soybean plasma membrane 47.98 53.19
PGSC0003DMT400082048 Potato plasma membrane 47.98 52.85
VIT_06s0004g00790.t01 Wine grape plasma membrane 47.79 52.42
Solyc01g005920.2.1 Tomato plasma membrane 47.6 52.21
Os03t0375300-02 Rice nucleus 53.93 51.37
KRH16786 Soybean plasma membrane 47.41 51.35
KRH42817 Soybean plasma membrane 47.6 51.35
KRH58913 Soybean plasma membrane 47.41 51.24
HORVU3Hr1G005120.1 Barley cytosol 20.35 51.21
PGSC0003DMT400028298 Potato mitochondrion, plasma membrane 46.07 51.06
Solyc01g034080.1.1 Tomato plasma membrane 46.07 51.06
CDX75722 Canola plasma membrane 26.3 50.74
VIT_06s0004g00800.t01 Wine grape plasma membrane 47.02 50.72
CDX82530 Canola plasma membrane 45.87 50.1
Bra001514.1-P Field mustard plasma membrane 45.87 50.1
PGSC0003DMT400082047 Potato plasma membrane 45.87 50.0
GSMUA_AchrUn_... Banana cytosol, peroxisome, plasma membrane 44.34 49.78
CDX75721 Canola plasma membrane 45.49 49.69
CDY23626 Canola plasma membrane 45.3 49.68
Bra027411.1-P Field mustard plasma membrane 45.11 49.27
CDX97502 Canola plasma membrane 45.11 49.27
AT3G13620.1 Thale cress plasma membrane 44.53 48.54
KRH45451 Soybean plasma membrane 18.43 44.24
EES13409 Sorghum plasma membrane 38.0 40.16
EES16229 Sorghum plasma membrane 37.62 39.92
OQU85562 Sorghum peroxisome, plasma membrane, vacuole 39.92 38.66
Protein Annotations
Gene3D:1.20.1740.10MapMan:24.2.3.5.1UniProt:A0A1B6QMZ4InterPro:AA/rel_permease1GO:GO:0003333GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015171GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlants:KXG39283ProteinID:KXG39283ProteinID:KXG39283.1
PFAM:PF13520PIRSF:PIRSF006060PANTHER:PTHR11785PANTHER:PTHR11785:SF378EnsemblPlantsGene:SORBI_3001G357700TMHMM:TMhelix
UniParc:UPI00081AD7F0SEG:seg::::
Description
hypothetical protein
Coordinates
chr1:+:64746396..64751377
Molecular Weight (calculated)
55334.3 Da
IEP (calculated)
9.411
GRAVY (calculated)
0.424
Length
521 amino acids
Sequence
(BLAST)
001: MNQEIQITKL PSQRQQQQEL PLPPEGVTIV QDGTSQDQQQ QAAQGRHGAV QGGGHGHHHH RSSRKLTVLP LIFLIYFEVA GGPYGSERAV RAAGPLFTLL
101: GFLVFPFAWG VPESLVTAEL SAALPGNGGF VRWADLAFGP LAGSLLGTWK YLSCVINIAA YPALVADYLA RVIPAVAGGR TRTGTVVGMT VFLSFVNYAG
201: LSIVGWGAVA LGLVSLAPFV LMTGIAAPKM RPRRWAVQVD GSKDWPLFFN TLFWNLNYWD SASTMAGEVE RPERTFPRAL AVAVVLIAAS YLLPLMAATG
301: ATDAPPDTWA NGYLADAAGI IGGPWLKYWI EAGAVVSSVG MFEAQLSSGA FQLLGMAELG LLPAVFARRA TLSGSGTPWV AIAASTAVTL AVSFLGFDVV
401: VATANFLYSL GTLLEFAAFL WLRASRPDLK RPYRVPLSSL PALAAMCAVP SAFLAYVCVV AGWRVFALAG GLTALGVGLH GAMRLCRSRK WLRFKTGVVA
501: AAEDHHQQQG DVVVVSAGDR V
Best Arabidopsis Sequence Match ( AT3G13620.1 )
(BLAST)
001: MAISEASKSS HELPVTTAES SGKKATAKKL TLIPLVFLIY FEVAGGPFGE EPAVQAAGPL LAILGFLIFP FIWSIPEALI TAELSTAFPG NGGFVIWAHR
101: AFGSFVGSMM GSLKFLSGVI NVASFPVLCV TYLDKLFPVL ESGWPRNVCI FASTVVLSFL NYTGLAIVGY AAVVLGLVSL SPFLVMSAMA IPKIKPHRWG
201: SLGTKKKDWN LYFNTLFWNL NFWDNVSTLA GEVDEPQKTF PLALLIAVIF TCVAYLIPLF AVTGAVSVDQ SRWENGFHAE AAEMIAGKWL KIWIEIGAVL
301: SSIGLFEAQL SSSAYQLEGM AELGFLPKFF GVRSKWFNTP WVGILISALM SLGLSYMNFT DIISSANFLY TLGMFLEFAS FIWLRRKLPQ LKRPYRVPLK
401: IPGLVVMCLI PSAFLVLILV FATKIVYLIC GVMTIGAIGW YFLINYFRKT KIFEFNEVID DLDNNVNGEH PKVDDHNS
Arabidopsis Description
PUT4 [Source:UniProtKB/TrEMBL;Acc:A0A178VLM5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.