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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, plasma membrane
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU4Hr1G085290.4 Barley golgi, peroxisome, plasma membrane 87.38 87.38
TraesCS5D01G321300.1 Wheat golgi, peroxisome, plasma membrane 81.07 82.53
Zm00001d029318_P001 Maize plasma membrane 44.58 74.83
Zm00001d029314_P001 Maize plasma membrane 68.84 72.71
KXG39283 Sorghum plasma membrane 73.77 71.78
OQU92528 Sorghum plasma membrane 68.24 70.04
Os03t0374900-00 Rice peroxisome, plasma membrane, vacuole 44.58 68.48
TraesCS5D01G321700.1 Wheat plasma membrane 25.44 67.19
TraesCS5D01G321500.1 Wheat golgi, mitochondrion, plasma membrane, plastid, vacuole 25.05 66.15
TraesCS7D01G452600.1 Wheat golgi, plasma membrane, vacuole 54.24 56.01
KRH72395 Soybean plasma membrane 49.7 53.62
PGSC0003DMT400082048 Potato plasma membrane 49.51 53.07
VIT_06s0004g00790.t01 Wine grape plasma membrane 49.51 52.84
KRH16786 Soybean plasma membrane 50.1 52.81
Solyc01g005920.2.1 Tomato plasma membrane 49.11 52.42
TraesCS5D01G531700.1 Wheat mitochondrion, plasma membrane 53.25 51.72
PGSC0003DMT400082047 Potato plasma membrane 47.73 50.63
Solyc01g034080.1.1 Tomato plasma membrane 46.75 50.43
CDX75722 Canola plasma membrane 26.82 50.37
KRH42817 Soybean plasma membrane 47.93 50.31
PGSC0003DMT400028298 Potato mitochondrion, plasma membrane 46.35 50.0
VIT_06s0004g00800.t01 Wine grape plasma membrane 47.53 49.9
Bra001514.1-P Field mustard plasma membrane 46.94 49.9
KRH58913 Soybean plasma membrane 47.34 49.79
CDX82530 Canola plasma membrane 46.75 49.69
CDX75721 Canola plasma membrane 46.75 49.69
CDY23626 Canola plasma membrane 46.15 49.26
CDX97502 Canola plasma membrane 46.15 49.06
Bra027411.1-P Field mustard plasma membrane 46.15 49.06
AT3G13620.1 Thale cress plasma membrane 46.15 48.95
GSMUA_AchrUn_... Banana cytosol, peroxisome, plasma membrane 43.2 47.2
Os03t0375300-02 Rice nucleus 49.9 46.25
KRH45451 Soybean plasma membrane 19.72 46.08
TraesCS6D01G245700.1 Wheat plasma membrane 39.84 40.56
TraesCS5D01G085800.1 Wheat golgi, plasma membrane, vacuole 37.67 39.46
TraesCS5D01G028100.1 Wheat plasma membrane 38.46 39.39
Protein Annotations
EnsemblPlants:TraesCS4D01G344800.1EnsemblPlantsGene:TraesCS4D01G344800Gene3D:1.20.1740.10GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0022857GO:GO:0055085InterPro:AA/rel_permease1
PANTHER:PTHR11785PANTHER:PTHR11785:SF378PFAM:PF13520PIRSF:PIRSF006060SEG:segTMHMM:TMhelix
MapMan:24.2.3.5.1:::::
Description
No Description!
Coordinates
chr4D:-:499729485..499734765
Molecular Weight (calculated)
54241.4 Da
IEP (calculated)
8.635
GRAVY (calculated)
0.511
Length
507 amino acids
Sequence
(BLAST)
001: MSQGFLLAAE QPSQRQEQQE LHDIVRQEHH GYTRQQGGGP TLSVYGHKRK ITLIPLVFLI YFEVAGGPYG AEKAVLAAGP LFTLLGFLVF PFAWGVPESL
101: ITAELAAAFP GNGGFVLWAD HAFGPLAGFL LGMWKYLSIV INIAAYTALI ADYLGGSGVA PAVAQPGGAR TGAVIGMTLL LSFVNYAGVS VVGWGAVALG
201: MVSLAPFVLM TAMAVPKVRP SRWASQVKGD KDWRLFFNTL FWNLNYWDCA STMAGEVERP EQTFPRALAL AVVLIASSYL LPLMAATGAI DAPPDAWVNG
301: YLADAAGIIG GPWLKYWTGA GAVISSIGMF EAQMSSGAFQ LLGMADLGLL PAVFSRRAAR TGTPWVAIAV STIVTIVVSF LCFDDVVATA NFLYSLGTLL
401: EFASFLWLRA KHPAMKRPYR VPLPLPALVA MCAVPSAFLA YVCVVAGWKV FALAGGLTML GVGWHGVMRV CKANKVLRFN NTVSADPQQD PGDDYHLVPG
501: VRNYRLA
Best Arabidopsis Sequence Match ( AT1G31830.1 )
(BLAST)
001: MQKRRIITVN PSASIEMSQY ENNEVPYSSV GADEVPSSPP KATDKIRKVS MLPLVFLIFY EVSGGPFGVE DSVNAAGPLL ALLGFVIFPF IWSIPEALIT
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR
Arabidopsis Description
Probable polyamine transporter At1g31830 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S5]
SUBAcon: [mitochondrion,plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.