Factsheet for VIT_06s0004g00790.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400082047	Potato	plasma membrane	68.42	67.99
VIT_06s0004g00800.t01	Wine grape	plasma membrane	68.0	66.87
KRH42817	Soybean	plasma membrane	68.0	66.87
KRH58913	Soybean	plasma membrane	67.37	66.39
TraesCS7B01G365600.1	Wheat	golgi, plasma membrane, vacuole	55.16	54.13
TraesCS7A01G464900.1	Wheat	golgi, plasma membrane, vacuole	54.53	53.85
Zm00001d029321_P001	Maize	plasma membrane	54.95	53.7
EER92207	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	28.21	53.17
TraesCSU01G202300.1	Wheat	plasma membrane	33.89	53.14
TraesCSU01G047000.1	Wheat	plasma membrane	33.89	53.14
TraesCS7D01G452600.1	Wheat	golgi, plasma membrane, vacuole	54.74	52.95
TraesCS5B01G533500.1	Wheat	plasma membrane	54.53	52.75
Os03t0375966-00	Rice	cytosol, golgi, peroxisome	34.53	52.56
EER92206	Sorghum	plasma membrane	54.53	52.22
Os03t0375900-01	Rice	plasma membrane	22.74	52.17
Zm00001d029318_P001	Maize	plasma membrane	32.84	51.66
TraesCS5D01G321300.1	Wheat	golgi, peroxisome, plasma membrane	53.68	51.2
HORVU7Hr1G106710.2	Barley	cytosol, plasma membrane	55.37	51.17
TraesCS5B01G316000.1	Wheat	golgi, peroxisome, plasma membrane	53.47	51.0
TraesCS5A01G315000.1	Wheat	golgi, peroxisome, plasma membrane	53.26	50.8
TraesCSU01G046900.1	Wheat	plasma membrane	15.79	50.34
TraesCS3A01G030900.1	Wheat	peroxisome, plasma membrane, vacuole	50.95	50.31
TraesCS4B01G350000.1	Wheat	golgi, peroxisome, plasma membrane	52.42	49.8
HORVU4Hr1G085290.4	Barley	golgi, peroxisome, plasma membrane	53.05	49.7
TraesCS5D01G531700.1	Wheat	mitochondrion, plasma membrane	54.53	49.62
TraesCS4D01G344800.1	Wheat	plasma membrane	52.84	49.51
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	48.0	49.14
Zm00001d029314_P001	Maize	plasma membrane	49.05	48.54
OQU92528	Sorghum	plasma membrane	50.32	48.38
Zm00001d029319_P001	Maize	endoplasmic reticulum, plasma membrane, plastid, vacuole	14.95	48.3
Zm00001d029320_P001	Maize	plasma membrane	31.58	48.23
TraesCS3B01G031700.1	Wheat	plasma membrane	51.37	48.22
Os03t0374900-00	Rice	peroxisome, plasma membrane, vacuole	33.26	47.88
KXG39283	Sorghum	plasma membrane	52.42	47.79
VIT_02s0033g01310.t01	Wine grape	plasma membrane	46.95	46.36
VIT_03s0038g02860.t01	Wine grape	plasma membrane	46.53	45.66
VIT_03s0091g00600.t01	Wine grape	plasma membrane	48.42	45.63
VIT_02s0033g01320.t01	Wine grape	plasma membrane	45.05	45.24
HORVU3Hr1G005010.3	Barley	vacuole	22.95	45.23
TraesCS5D01G321500.1	Wheat	golgi, mitochondrion, plasma membrane, plastid, vacuole	16.84	41.67
TraesCS5D01G321700.1	Wheat	plasma membrane	16.63	41.15
HORVU3Hr1G005120.1	Barley	cytosol	17.47	40.1
TraesCS5A01G315600.1	Wheat	extracellular, plasma membrane, vacuole	11.79	36.84
Os03t0375300-02	Rice	nucleus	37.47	32.54

Protein Annotations

Gene3D:1.20.1740.10	EntrezGene:100258779	wikigene:100258779	MapMan:24.2.3.5.1	InterPro:AA/rel_permease1	ProteinID:CCB43793
ProteinID:CCB43793.1	UniProt:F6GUJ8	EMBL:FN594951	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0008150
GO:GO:0015171	GO:GO:0015203	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	GO:GO:1902047	EntrezGene:LOC100258779	wikigene:LOC100258779	PFAM:PF13520	PIRSF:PIRSF006060
PANTHER:PTHR11785	PANTHER:PTHR11785:SF359	TMHMM:TMhelix	UniParc:UPI00019835C5	ArrayExpress:VIT_06s0004g00790	EnsemblPlantsGene:VIT_06s0004g00790
EnsemblPlants:VIT_06s0004g00790.t01	RefSeq:XP_002283531	RefSeq:XP_002283531.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr6:-:903756..905215

Molecular Weight (calculated)

52321.7 Da

IEP (calculated)

5.434

GRAVY (calculated)

0.703

Length

475 amino acids

Sequence
(BLAST)

001: MGISHSTPKS PPYLLEEPLP TASTTATATK DPKKLALIPL IFLIYFEVAG GPYGEEQAVG AAGPLLAILG FLIFPFIWSI PEALVTAELA TTFPGNGGFV
101: IWAHQAFGPF WGSLMGSWKF LCGVINIASY PVLCVDYLKL LFPIFSSGLP RYLAVLFSTL LLSFLNYTGL SIVGYTAVSL GIISLSPFLV LTLISIPKIE
201: PIRWLSLGEK GVKKDWTLFF NTLFWNLNFW DSASTLAGEV DQPQKTFPKA LFSAGMLVCL AYLIPLLAAT GAIPLDQEDW VDGYFANVAQ IIAGKWLKVW
301: VEVGAVLSTI GLFEAQLSSC AYQLLGMADL GFVPRFFGVR STWFNTPWVG ILISTVFGLA VSFMDFSDII SSANFLYSLG MLLEFASFLW LRRRWPAVNR
401: PYKVPMGLPG LVIMCLVPSG FLVFVMAIAT KTVCMVSGLL TLVGIFWYFL MNFCKSRMWL GFDTVRERVE DGDVE

Best Arabidopsis Sequence Match ( AT3G13620.1 )
(BLAST)

001: MAISEASKSS HELPVTTAES SGKKATAKKL TLIPLVFLIY FEVAGGPFGE EPAVQAAGPL LAILGFLIFP FIWSIPEALI TAELSTAFPG NGGFVIWAHR
101: AFGSFVGSMM GSLKFLSGVI NVASFPVLCV TYLDKLFPVL ESGWPRNVCI FASTVVLSFL NYTGLAIVGY AAVVLGLVSL SPFLVMSAMA IPKIKPHRWG
201: SLGTKKKDWN LYFNTLFWNL NFWDNVSTLA GEVDEPQKTF PLALLIAVIF TCVAYLIPLF AVTGAVSVDQ SRWENGFHAE AAEMIAGKWL KIWIEIGAVL
301: SSIGLFEAQL SSSAYQLEGM AELGFLPKFF GVRSKWFNTP WVGILISALM SLGLSYMNFT DIISSANFLY TLGMFLEFAS FIWLRRKLPQ LKRPYRVPLK
401: IPGLVVMCLI PSAFLVLILV FATKIVYLIC GVMTIGAIGW YFLINYFRKT KIFEFNEVID DLDNNVNGEH PKVDDHNS

Arabidopsis Description

PUT4 [Source:UniProtKB/TrEMBL;Acc:A0A178VLM5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.