Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 1
- plasma membrane 1
- mitochondrion 1
- cytosol 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Os03t0374900-00 | Rice | peroxisome, plasma membrane, vacuole | 60.9 | 57.58 |
CDX75722 | Canola | plasma membrane | 45.19 | 52.22 |
TraesCS7B01G365600.1 | Wheat | golgi, plasma membrane, vacuole | 75.96 | 48.97 |
TraesCS7A01G464900.1 | Wheat | golgi, plasma membrane, vacuole | 75.32 | 48.86 |
TraesCS7D01G452600.1 | Wheat | golgi, plasma membrane, vacuole | 76.28 | 48.47 |
Zm00001d029321_P001 | Maize | plasma membrane | 75.32 | 48.35 |
TraesCS5B01G533500.1 | Wheat | plasma membrane | 75.64 | 48.07 |
HORVU7Hr1G106710.2 | Barley | cytosol, plasma membrane | 75.32 | 45.72 |
TraesCS5D01G531700.1 | Wheat | mitochondrion, plasma membrane | 75.96 | 45.4 |
EER92206 | Sorghum | plasma membrane | 71.79 | 45.16 |
KRH72395 | Soybean | plasma membrane | 53.53 | 35.53 |
KRH16786 | Soybean | plasma membrane | 54.17 | 35.14 |
VIT_06s0004g00790.t01 | Wine grape | plasma membrane | 52.56 | 34.53 |
Solyc01g034080.1.1 | Tomato | plasma membrane | 51.92 | 34.47 |
PGSC0003DMT400028298 | Potato | mitochondrion, plasma membrane | 51.92 | 34.47 |
Os03t0375300-02 | Rice | nucleus | 60.26 | 34.37 |
Solyc01g005920.2.1 | Tomato | plasma membrane | 52.24 | 34.32 |
PGSC0003DMT400082048 | Potato | plasma membrane | 51.92 | 34.25 |
VIT_06s0004g00800.t01 | Wine grape | plasma membrane | 52.56 | 33.95 |
Bra001514.1-P | Field mustard | plasma membrane | 51.6 | 33.75 |
CDX82530 | Canola | plasma membrane | 51.6 | 33.75 |
CDX75721 | Canola | plasma membrane | 51.6 | 33.75 |
CDY23626 | Canola | plasma membrane | 50.96 | 33.47 |
Bra027411.1-P | Field mustard | plasma membrane | 50.96 | 33.33 |
CDX97502 | Canola | plasma membrane | 50.96 | 33.33 |
PGSC0003DMT400082047 | Potato | plasma membrane | 50.96 | 33.26 |
AT3G13620.1 | Thale cress | plasma membrane | 50.32 | 32.85 |
KRH58913 | Soybean | plasma membrane | 50.64 | 32.78 |
KRH42817 | Soybean | plasma membrane | 50.64 | 32.71 |
GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plasma membrane | 44.23 | 29.74 |
Os02t0700500-01 | Rice | cytosol, peroxisome, plasma membrane | 43.91 | 25.8 |
Os12t0580400-01 | Rice | plasma membrane | 39.74 | 25.0 |
Os03t0576900-01 | Rice | plastid | 43.91 | 24.91 |
KRH45451 | Soybean | plasma membrane | 3.85 | 5.53 |
Os03t0375900-01 | Rice | plasma membrane | 2.88 | 4.35 |
Protein Annotations
Gene3D:1.20.1740.10 | MapMan:24.2.3.5.1 | UniProt:A0A0P0VYU0 | InterPro:AA/rel_permease1 | ProteinID:BAS84408.1 | GO:GO:0003674 |
GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 |
GO:GO:0008150 | GO:GO:0015203 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 |
GO:GO:0055085 | GO:GO:1902047 | EnsemblPlantsGene:Os03g0375966 | EnsemblPlants:Os03t0375966-00 | PFAM:PF13520 | PANTHER:PTHR11785 |
PANTHER:PTHR11785:SF378 | TMHMM:TMhelix | UniParc:UPI00039392C0 | SEG:seg | : | : |
Description
OsLAT4Similar to Amino acid permease family protein. (Os03t0375966-00)
Coordinates
chr3:-:14838184..14839122
Molecular Weight (calculated)
32295.9 Da
IEP (calculated)
8.989
GRAVY (calculated)
0.470
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEEAHRLA DASATAPPKN AAAVDGVAVA APAAGGGHGR APGNKLSLVP LIFLIFFEVA GGPYGAEPAV QSAGPLFALL GFLVFPFIWA VPESLVTAEL
101: ATAMPGNGGF VLWADRAFGP FAGSLMGTWK YVSGAINGAA FPALCADYVA RVAPAVSGGG ARVAAIVAFN VAISVLNYTG LSIVGWTAVA LGVASLSPFA
201: LMFGAALPKI RPRRWRATAA DKDWKLFFNT LFWNLNYWDS ASTMAGEVER PGRTFPRALL SAVAMTTLGY LLPLLAATGA IDAAPEDWGN GFFADAAGKF
301: FRSPTTPSNR IQ
101: ATAMPGNGGF VLWADRAFGP FAGSLMGTWK YVSGAINGAA FPALCADYVA RVAPAVSGGG ARVAAIVAFN VAISVLNYTG LSIVGWTAVA LGVASLSPFA
201: LMFGAALPKI RPRRWRATAA DKDWKLFFNT LFWNLNYWDS ASTMAGEVER PGRTFPRALL SAVAMTTLGY LLPLLAATGA IDAAPEDWGN GFFADAAGKF
301: FRSPTTPSNR IQ
001: MQKRRIITVN PSASIEMSQY ENNEVPYSSV GADEVPSSPP KATDKIRKVS MLPLVFLIFY EVSGGPFGVE DSVNAAGPLL ALLGFVIFPF IWSIPEALIT
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR
Arabidopsis Description
Probable polyamine transporter At1g31830 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S5]
SUBAcon: [mitochondrion,plasma membrane,golgi]
SUBAcon: [mitochondrion,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.