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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, cytosol

Predictor Summary:
  • nucleus 1
  • golgi 1
  • plasma membrane 1
  • mitochondrion 1
  • cytosol 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os03t0374900-00 Rice peroxisome, plasma membrane, vacuole 60.9 57.58
CDX75722 Canola plasma membrane 45.19 52.22
TraesCS7B01G365600.1 Wheat golgi, plasma membrane, vacuole 75.96 48.97
TraesCS7A01G464900.1 Wheat golgi, plasma membrane, vacuole 75.32 48.86
TraesCS7D01G452600.1 Wheat golgi, plasma membrane, vacuole 76.28 48.47
Zm00001d029321_P001 Maize plasma membrane 75.32 48.35
TraesCS5B01G533500.1 Wheat plasma membrane 75.64 48.07
HORVU7Hr1G106710.2 Barley cytosol, plasma membrane 75.32 45.72
TraesCS5D01G531700.1 Wheat mitochondrion, plasma membrane 75.96 45.4
EER92206 Sorghum plasma membrane 71.79 45.16
KRH72395 Soybean plasma membrane 53.53 35.53
KRH16786 Soybean plasma membrane 54.17 35.14
VIT_06s0004g00790.t01 Wine grape plasma membrane 52.56 34.53
Solyc01g034080.1.1 Tomato plasma membrane 51.92 34.47
PGSC0003DMT400028298 Potato mitochondrion, plasma membrane 51.92 34.47
Os03t0375300-02 Rice nucleus 60.26 34.37
Solyc01g005920.2.1 Tomato plasma membrane 52.24 34.32
PGSC0003DMT400082048 Potato plasma membrane 51.92 34.25
VIT_06s0004g00800.t01 Wine grape plasma membrane 52.56 33.95
Bra001514.1-P Field mustard plasma membrane 51.6 33.75
CDX82530 Canola plasma membrane 51.6 33.75
CDX75721 Canola plasma membrane 51.6 33.75
CDY23626 Canola plasma membrane 50.96 33.47
Bra027411.1-P Field mustard plasma membrane 50.96 33.33
CDX97502 Canola plasma membrane 50.96 33.33
PGSC0003DMT400082047 Potato plasma membrane 50.96 33.26
AT3G13620.1 Thale cress plasma membrane 50.32 32.85
KRH58913 Soybean plasma membrane 50.64 32.78
KRH42817 Soybean plasma membrane 50.64 32.71
GSMUA_AchrUn_... Banana cytosol, peroxisome, plasma membrane 44.23 29.74
Os02t0700500-01 Rice cytosol, peroxisome, plasma membrane 43.91 25.8
Os12t0580400-01 Rice plasma membrane 39.74 25.0
Os03t0576900-01 Rice plastid 43.91 24.91
KRH45451 Soybean plasma membrane 3.85 5.53
Os03t0375900-01 Rice plasma membrane 2.88 4.35
Protein Annotations
Gene3D:1.20.1740.10MapMan:24.2.3.5.1UniProt:A0A0P0VYU0InterPro:AA/rel_permease1ProteinID:BAS84408.1GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0005887GO:GO:0006810
GO:GO:0008150GO:GO:0015203GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0022857
GO:GO:0055085GO:GO:1902047EnsemblPlantsGene:Os03g0375966EnsemblPlants:Os03t0375966-00PFAM:PF13520PANTHER:PTHR11785
PANTHER:PTHR11785:SF378TMHMM:TMhelixUniParc:UPI00039392C0SEG:seg::
Description
OsLAT4Similar to Amino acid permease family protein. (Os03t0375966-00)
Coordinates
chr3:-:14838184..14839122
Molecular Weight (calculated)
32295.9 Da
IEP (calculated)
8.989
GRAVY (calculated)
0.470
Length
312 amino acids
Sequence
(BLAST)
001: MAAEEAHRLA DASATAPPKN AAAVDGVAVA APAAGGGHGR APGNKLSLVP LIFLIFFEVA GGPYGAEPAV QSAGPLFALL GFLVFPFIWA VPESLVTAEL
101: ATAMPGNGGF VLWADRAFGP FAGSLMGTWK YVSGAINGAA FPALCADYVA RVAPAVSGGG ARVAAIVAFN VAISVLNYTG LSIVGWTAVA LGVASLSPFA
201: LMFGAALPKI RPRRWRATAA DKDWKLFFNT LFWNLNYWDS ASTMAGEVER PGRTFPRALL SAVAMTTLGY LLPLLAATGA IDAAPEDWGN GFFADAAGKF
301: FRSPTTPSNR IQ
Best Arabidopsis Sequence Match ( AT1G31830.1 )
(BLAST)
001: MQKRRIITVN PSASIEMSQY ENNEVPYSSV GADEVPSSPP KATDKIRKVS MLPLVFLIFY EVSGGPFGVE DSVNAAGPLL ALLGFVIFPF IWSIPEALIT
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR
Arabidopsis Description
Probable polyamine transporter At1g31830 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S5]
SUBAcon: [mitochondrion,plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.