Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97502 | Canola | plasma membrane | 90.17 | 90.36 |
| Bra027411.1-P | Field mustard | plasma membrane | 89.96 | 90.15 |
| CDY23626 | Canola | plasma membrane | 89.54 | 90.11 |
| Bra001514.1-P | Field mustard | plasma membrane | 87.66 | 87.84 |
| CDX75721 | Canola | plasma membrane | 87.66 | 87.84 |
| CDX82530 | Canola | plasma membrane | 87.45 | 87.63 |
| CDX75722 | Canola | plasma membrane | 48.74 | 86.3 |
| KRH72395 | Soybean | plasma membrane | 69.87 | 71.06 |
| PGSC0003DMT400028298 | Potato | mitochondrion, plasma membrane | 68.62 | 69.79 |
| Solyc01g034080.1.1 | Tomato | plasma membrane | 67.78 | 68.94 |
| KRH16786 | Soybean | plasma membrane | 69.04 | 68.61 |
| Solyc01g005920.2.1 | Tomato | plasma membrane | 67.99 | 68.42 |
| PGSC0003DMT400082048 | Potato | plasma membrane | 67.36 | 68.08 |
| VIT_06s0004g00800.t01 | Wine grape | plasma membrane | 68.41 | 67.7 |
| KRH45451 | Soybean | plasma membrane | 27.82 | 61.29 |
| TraesCS7A01G464900.1 | Wheat | golgi, plasma membrane, vacuole | 52.51 | 52.18 |
| TraesCS7B01G365600.1 | Wheat | golgi, plasma membrane, vacuole | 52.3 | 51.65 |
| TraesCS7D01G452600.1 | Wheat | golgi, plasma membrane, vacuole | 52.72 | 51.32 |
| TraesCS5B01G533500.1 | Wheat | plasma membrane | 52.72 | 51.32 |
| EER92207 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 26.99 | 51.19 |
| Zm00001d029321_P001 | Maize | plasma membrane | 51.88 | 51.03 |
| Os03t0375966-00 | Rice | cytosol, golgi, peroxisome | 32.85 | 50.32 |
| EER92206 | Sorghum | plasma membrane | 51.67 | 49.8 |
| TraesCSU01G202300.1 | Wheat | plasma membrane | 31.38 | 49.51 |
| TraesCSU01G047000.1 | Wheat | plasma membrane | 31.38 | 49.51 |
| HORVU7Hr1G106710.2 | Barley | cytosol, plasma membrane | 52.72 | 49.03 |
| Zm00001d029318_P001 | Maize | plasma membrane | 30.54 | 48.34 |
| TraesCS5D01G531700.1 | Wheat | mitochondrion, plasma membrane | 52.72 | 48.28 |
| TraesCS5D01G321300.1 | Wheat | golgi, peroxisome, plasma membrane | 49.37 | 47.39 |
| TraesCS5B01G316000.1 | Wheat | golgi, peroxisome, plasma membrane | 49.16 | 47.19 |
| TraesCS5A01G315000.1 | Wheat | golgi, peroxisome, plasma membrane | 49.16 | 47.19 |
| AT3G19553.1 | Thale cress | plasma membrane | 47.28 | 47.18 |
| Os03t0374900-00 | Rice | peroxisome, plasma membrane, vacuole | 32.43 | 46.97 |
| TraesCS4B01G350000.1 | Wheat | golgi, peroxisome, plasma membrane | 48.54 | 46.4 |
| OQU92528 | Sorghum | plasma membrane | 47.91 | 46.36 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plasma membrane | 44.98 | 46.34 |
| TraesCS4D01G344800.1 | Wheat | plasma membrane | 48.95 | 46.15 |
| Zm00001d029314_P001 | Maize | plasma membrane | 46.23 | 46.04 |
| Zm00001d029320_P001 | Maize | plasma membrane | 29.92 | 45.98 |
| HORVU4Hr1G085290.4 | Barley | golgi, peroxisome, plasma membrane | 48.74 | 45.96 |
| TraesCS3A01G030900.1 | Wheat | peroxisome, plasma membrane, vacuole | 46.23 | 45.95 |
| TraesCSU01G046900.1 | Wheat | plasma membrane | 14.23 | 45.64 |
| KXG39283 | Sorghum | plasma membrane | 48.54 | 44.53 |
| TraesCS3B01G031700.1 | Wheat | plasma membrane | 46.65 | 44.07 |
| HORVU3Hr1G005010.3 | Barley | vacuole | 22.18 | 43.98 |
| Os03t0375900-01 | Rice | plasma membrane | 19.04 | 43.96 |
| AT1G31820.1 | Thale cress | plasma membrane | 43.72 | 43.36 |
| AT5G05630.1 | Thale cress | plasma membrane | 43.72 | 42.65 |
| AT1G31830.1 | Thale cress | golgi, mitochondrion, plasma membrane | 41.63 | 40.2 |
| Zm00001d029319_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid, vacuole | 12.13 | 39.46 |
| HORVU3Hr1G005120.1 | Barley | cytosol | 16.95 | 39.13 |
| TraesCS5D01G321500.1 | Wheat | golgi, mitochondrion, plasma membrane, plastid, vacuole | 15.69 | 39.06 |
| TraesCS5D01G321700.1 | Wheat | plasma membrane | 15.48 | 38.54 |
| TraesCS5A01G315600.1 | Wheat | extracellular, plasma membrane, vacuole | 11.51 | 36.18 |
| Os03t0375300-02 | Rice | nucleus | 36.4 | 31.81 |
Protein Annotations
| Gene3D:1.20.1740.10 | MapMan:24.2.3.5.1 | EntrezGene:820565 | UniProt:A0A178VLM5 | InterPro:AA/rel_permease1 | ProteinID:AEE75383.1 |
| ArrayExpress:AT3G13620 | EnsemblPlantsGene:AT3G13620 | RefSeq:AT3G13620 | TAIR:AT3G13620 | RefSeq:AT3G13620-TAIR-G | EnsemblPlants:AT3G13620.1 |
| TAIR:AT3G13620.1 | EMBL:AY056273 | Unigene:At.68198 | ProteinID:BAB02604.1 | GO:GO:0003333 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0015171 | GO:GO:0015203 | GO:GO:0015293 | GO:GO:0015297 | GO:GO:0015846 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | GO:GO:1902047 | RefSeq:NP_566460.1 |
| ProteinID:OAP05732.1 | PFAM:PF13520 | PIRSF:PIRSF006060 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR11785 | PANTHER:PTHR11785:SF378 | UniProt:Q9LHN7 |
| TMHMM:TMhelix | UniParc:UPI00000486FF | : | : | : | : |
Description
PUT4 [Source:UniProtKB/TrEMBL;Acc:A0A178VLM5]
Coordinates
chr3:-:4450745..4452653
Molecular Weight (calculated)
52738.1 Da
IEP (calculated)
7.884
GRAVY (calculated)
0.605
Length
478 amino acids
Sequence
(BLAST)
(BLAST)
001: MAISEASKSS HELPVTTAES SGKKATAKKL TLIPLVFLIY FEVAGGPFGE EPAVQAAGPL LAILGFLIFP FIWSIPEALI TAELSTAFPG NGGFVIWAHR
101: AFGSFVGSMM GSLKFLSGVI NVASFPVLCV TYLDKLFPVL ESGWPRNVCI FASTVVLSFL NYTGLAIVGY AAVVLGLVSL SPFLVMSAMA IPKIKPHRWG
201: SLGTKKKDWN LYFNTLFWNL NFWDNVSTLA GEVDEPQKTF PLALLIAVIF TCVAYLIPLF AVTGAVSVDQ SRWENGFHAE AAEMIAGKWL KIWIEIGAVL
301: SSIGLFEAQL SSSAYQLEGM AELGFLPKFF GVRSKWFNTP WVGILISALM SLGLSYMNFT DIISSANFLY TLGMFLEFAS FIWLRRKLPQ LKRPYRVPLK
401: IPGLVVMCLI PSAFLVLILV FATKIVYLIC GVMTIGAIGW YFLINYFRKT KIFEFNEVID DLDNNVNGEH PKVDDHNS
101: AFGSFVGSMM GSLKFLSGVI NVASFPVLCV TYLDKLFPVL ESGWPRNVCI FASTVVLSFL NYTGLAIVGY AAVVLGLVSL SPFLVMSAMA IPKIKPHRWG
201: SLGTKKKDWN LYFNTLFWNL NFWDNVSTLA GEVDEPQKTF PLALLIAVIF TCVAYLIPLF AVTGAVSVDQ SRWENGFHAE AAEMIAGKWL KIWIEIGAVL
301: SSIGLFEAQL SSSAYQLEGM AELGFLPKFF GVRSKWFNTP WVGILISALM SLGLSYMNFT DIISSANFLY TLGMFLEFAS FIWLRRKLPQ LKRPYRVPLK
401: IPGLVVMCLI PSAFLVLILV FATKIVYLIC GVMTIGAIGW YFLINYFRKT KIFEFNEVID DLDNNVNGEH PKVDDHNS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.