Factsheet for HORVU4Hr1G085290.4

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

golgi 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane
Any Predictor:	golgi, peroxisome, plasma membrane
MultiLoc:	golgi
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G350000.1	Wheat	golgi, peroxisome, plasma membrane	86.78	88.0
TraesCS4D01G344800.1	Wheat	plasma membrane	87.38	87.38
TraesCSU01G046900.1	Wheat	plasma membrane	23.27	79.19
Zm00001d029318_P001	Maize	plasma membrane	44.38	74.5
HORVU3Hr1G005010.3	Barley	vacuole	34.52	72.61
Zm00001d029314_P001	Maize	plasma membrane	66.27	70.0
KXG39283	Sorghum	plasma membrane	71.79	69.87
Os03t0374900-00	Rice	peroxisome, plasma membrane, vacuole	44.58	68.48
OQU92528	Sorghum	plasma membrane	65.48	67.21
TraesCS5D01G321700.1	Wheat	plasma membrane	25.25	66.67
TraesCS5D01G321500.1	Wheat	golgi, mitochondrion, plasma membrane, plastid, vacuole	25.25	66.67
TraesCS5A01G315600.1	Wheat	extracellular, plasma membrane, vacuole	19.13	63.82
VIT_06s0004g00790.t01	Wine grape	plasma membrane	49.7	53.05
KRH72395	Soybean	plasma membrane	49.11	52.98
PGSC0003DMT400082048	Potato	plasma membrane	49.31	52.85
HORVU7Hr1G106710.2	Barley	cytosol, plasma membrane	53.45	52.72
HORVU3Hr1G005120.1	Barley	cytosol	21.5	52.66
Solyc01g005920.2.1	Tomato	plasma membrane	48.92	52.21
KRH16786	Soybean	plasma membrane	49.51	52.18
CDX75722	Canola	plasma membrane	27.42	51.48
Solyc01g034080.1.1	Tomato	plasma membrane	47.34	51.06
PGSC0003DMT400028298	Potato	mitochondrion, plasma membrane	46.75	50.43
PGSC0003DMT400082047	Potato	plasma membrane	47.53	50.42
VIT_06s0004g00800.t01	Wine grape	plasma membrane	47.73	50.1
KRH42817	Soybean	plasma membrane	47.73	50.1
Bra001514.1-P	Field mustard	plasma membrane	46.75	49.69
CDX75721	Canola	plasma membrane	46.75	49.69
KRH58913	Soybean	plasma membrane	47.14	49.59
CDX82530	Canola	plasma membrane	46.55	49.48
CDY23626	Canola	plasma membrane	45.96	49.05
CDX97502	Canola	plasma membrane	45.96	48.85
Bra027411.1-P	Field mustard	plasma membrane	45.96	48.85
AT3G13620.1	Thale cress	plasma membrane	45.96	48.74
Os03t0375300-02	Rice	nucleus	50.1	46.44
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	42.41	46.34
KRH45451	Soybean	plasma membrane	18.74	43.78
HORVU5Hr1G006170.3	Barley	golgi, plasma membrane	38.66	38.89
HORVU5Hr1G019110.1	Barley	plastid	37.87	34.66
HORVU6Hr1G068230.1	Barley	plastid	38.66	34.09

Protein Annotations

EnsemblPlants:HORVU4Hr1G085290.4	EnsemblPlantsGene:HORVU4Hr1G085290	Gene3D:1.20.1740.10	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:AA/rel_permease1	PANTHER:PTHR11785	PANTHER:PTHR11785:SF378	PFAM:PF13520	PIRSF:PIRSF006060	SEG:seg
TMHMM:TMhelix	UniParc:UPI000B465223	UniProt:A0A287PY89	MapMan:24.2.3.5.1	:	:

Description

No Description!

Coordinates

chrchr4H:-:631473608..631479422

Molecular Weight (calculated)

54322.6 Da

IEP (calculated)

9.466

GRAVY (calculated)

0.467

Length

507 amino acids

Sequence
(BLAST)

001: MSQEFLLVAG QPSPRQEQQV LHAVVREEER TPGDRQRQHG YAAVQQGRGP TLSGYGHKRN ITLIPLVFLI YFEVAGGPYG AEKAVLAAGP LFTLLGFLVF
101: PFAWGVPESL ITAELATAFP GNGGFVLWAG HAFGPLAGFL LGLWKYLSVV INIAAYTALI ADYLGGAVAQ PGGARTGTVI GMTLLLSFVN YAGLSIVGWG
201: AVALGMVSLA PFVLMTAMAV PKIRPSRWAS QVTKGKKDWR LFFNTLFWNL NYWDCASTMA GEVERPERTF PRALAVAVVL IAGSYLLPLM AAIGATDASP
301: DAWVNGYLAD EAGIIGGPWL KYWTGAGAVI SSIGMFEAQM SSGAFQLLGM ADLGLLPAVF SRRAARTDTP WVAIAVSTVV TIAVSFLRFD DVVATANFLY
401: SLGTMLEFAS FLSLRVKHPT MKRPYRVPLP LPALVAMCAV PSSFLAYVCV VAGWRVSALA AGLTMLGVGW HCVMRVCKAK KLLTFNNNTV SADPRRDTAD
501: GYHLVSG

Best Arabidopsis Sequence Match ( AT1G31830.1 )
(BLAST)

001: MQKRRIITVN PSASIEMSQY ENNEVPYSSV GADEVPSSPP KATDKIRKVS MLPLVFLIFY EVSGGPFGVE DSVNAAGPLL ALLGFVIFPF IWSIPEALIT
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR

Arabidopsis Description

Probable polyamine transporter At1g31830 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S5]
SUBAcon: [mitochondrion,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.