Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome, plasma membrane
Any Predictor:golgi, peroxisome, plasma membrane
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU4Hr1G085290.4 Barley golgi, peroxisome, plasma membrane 88.0 86.78
TraesCS5B01G316000.1 Wheat golgi, peroxisome, plasma membrane 80.8 81.12
TraesCSU01G046900.1 Wheat plasma membrane 23.2 77.85
TraesCS3B01G031700.1 Wheat plasma membrane 75.4 74.51
Zm00001d029318_P001 Maize plasma membrane 44.4 73.51
Zm00001d029314_P001 Maize plasma membrane 69.2 72.08
KXG39283 Sorghum plasma membrane 73.2 70.25
OQU92528 Sorghum plasma membrane 69.0 69.84
TraesCS5D01G321700.1 Wheat plasma membrane 26.4 68.75
Os03t0374900-00 Rice peroxisome, plasma membrane, vacuole 45.0 68.18
TraesCS5D01G321500.1 Wheat golgi, mitochondrion, plasma membrane, plastid, vacuole 26.0 67.71
TraesCS5A01G315600.1 Wheat extracellular, plasma membrane, vacuole 20.0 65.79
TraesCS7B01G365600.1 Wheat golgi, plasma membrane, vacuole 55.0 56.82
TraesCS5B01G533500.1 Wheat plasma membrane 54.2 55.19
PGSC0003DMT400082048 Potato plasma membrane 51.0 53.91
KRH72395 Soybean plasma membrane 50.0 53.19
Solyc01g005920.2.1 Tomato plasma membrane 50.2 52.84
VIT_06s0004g00790.t01 Wine grape plasma membrane 49.8 52.42
KRH16786 Soybean plasma membrane 50.2 52.18
CDX75722 Canola plasma membrane 28.0 51.85
Solyc01g034080.1.1 Tomato plasma membrane 48.2 51.28
PGSC0003DMT400082047 Potato plasma membrane 49.0 51.26
KRH42817 Soybean plasma membrane 49.0 50.72
PGSC0003DMT400028298 Potato mitochondrion, plasma membrane 47.6 50.64
VIT_06s0004g00800.t01 Wine grape plasma membrane 48.6 50.31
CDX75721 Canola plasma membrane 47.6 49.9
Bra001514.1-P Field mustard plasma membrane 47.6 49.9
KRH58913 Soybean plasma membrane 48.0 49.79
CDX82530 Canola plasma membrane 47.4 49.69
Bra027411.1-P Field mustard plasma membrane 47.0 49.27
CDX97502 Canola plasma membrane 46.8 49.06
CDY23626 Canola plasma membrane 46.6 49.05
AT3G13620.1 Thale cress plasma membrane 46.4 48.54
GSMUA_AchrUn_... Banana cytosol, peroxisome, plasma membrane 43.8 47.2
Os03t0375300-02 Rice nucleus 49.8 45.52
KRH45451 Soybean plasma membrane 19.4 44.7
TraesCS5B01G079100.1 Wheat golgi, plasma membrane, vacuole 38.4 39.59
TraesCS5B01G019600.1 Wheat mitochondrion, plasma membrane 39.0 39.39
TraesCS6B01G296500.2 Wheat plasma membrane 39.8 37.48
Protein Annotations
EnsemblPlants:TraesCS4B01G350000.1EnsemblPlantsGene:TraesCS4B01G350000Gene3D:1.20.1740.10GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0022857GO:GO:0055085InterPro:AA/rel_permease1
PANTHER:PTHR11785PANTHER:PTHR11785:SF378PFAM:PF13520PIRSF:PIRSF006060SEG:segTMHMM:TMhelix
MapMan:24.2.3.5.1:::::
Description
No Description!
Coordinates
chr4B:-:642922963..642925223
Molecular Weight (calculated)
53645.8 Da
IEP (calculated)
8.809
GRAVY (calculated)
0.539
Length
500 amino acids
Sequence
(BLAST)
001: MSQEFLLATE QPSQSHEQQE LHDIVRQEHH GYTMQQGGGP TLSGYGHKRK ITLIPLVFLI YFEVAGGPYG AEKAVLAAGP LFTLLGFLIF PFAWGVPESL
101: ITAELATAFP GNGGFVLWAD HAFGPLAGFL LGMWKYLSIV INIAAYTALI ADYLGGSGVA PAVAQPGGAR TAAVIGMTLL LSLVNYAGVS VVGWGAVALG
201: MVSLAPFVLM TAMAVPKVRP SRWASQVKGE KDWRLFFNTL FWNLNYWDCA STMAGEVERP ERTFPRALAV AVVLIAGSYL LPLMAATGAT DASPDAWVNG
301: YLADAAGIIG GPWLKYWTGA GAVISSIGMF EAQMSSGTFQ LLGMADMGLL PAVFSRRAAR TGTPWVAIVV STVVTIAVSF LYFDDVVATA NFLYSLGTLL
401: EFASFLWLRM KYPALKRPYR VPLSLPALVA MCAVPSSFLA YVCVVAGWRV FTLAAGLTTL GVGWHCVMRV CKAKKLLKFN NAAAANPQLY ARDNYHLVLG
Best Arabidopsis Sequence Match ( AT1G31830.1 )
(BLAST)
001: MQKRRIITVN PSASIEMSQY ENNEVPYSSV GADEVPSSPP KATDKIRKVS MLPLVFLIFY EVSGGPFGVE DSVNAAGPLL ALLGFVIFPF IWSIPEALIT
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR
Arabidopsis Description
Probable polyamine transporter At1g31830 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S5]
SUBAcon: [mitochondrion,plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.