Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- vacuole 1
- mitochondrion 1
- plasma membrane 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3A01G030900.1 | Wheat | peroxisome, plasma membrane, vacuole | 89.13 | 93.76 |
TraesCSU01G202300.1 | Wheat | plasma membrane | 48.62 | 81.19 |
TraesCSU01G047000.1 | Wheat | plasma membrane | 48.62 | 81.19 |
TraesCS5B01G316000.1 | Wheat | golgi, peroxisome, plasma membrane | 76.09 | 77.31 |
TraesCS4B01G350000.1 | Wheat | golgi, peroxisome, plasma membrane | 74.51 | 75.4 |
HORVU3Hr1G005010.3 | Barley | vacuole | 34.19 | 71.78 |
Zm00001d029314_P001 | Maize | plasma membrane | 66.01 | 69.58 |
KXG39283 | Sorghum | plasma membrane | 71.54 | 69.48 |
Os03t0374900-00 | Rice | peroxisome, plasma membrane, vacuole | 45.26 | 69.39 |
OQU92528 | Sorghum | plasma membrane | 66.4 | 68.02 |
Zm00001d029318_P001 | Maize | plasma membrane | 40.51 | 67.88 |
TraesCS7B01G365600.1 | Wheat | golgi, plasma membrane, vacuole | 52.17 | 54.55 |
TraesCS5B01G533500.1 | Wheat | plasma membrane | 51.78 | 53.36 |
VIT_06s0004g00790.t01 | Wine grape | plasma membrane | 48.22 | 51.37 |
PGSC0003DMT400082048 | Potato | plasma membrane | 47.63 | 50.95 |
Solyc01g005920.2.1 | Tomato | plasma membrane | 47.23 | 50.32 |
KRH72395 | Soybean | plasma membrane | 46.44 | 50.0 |
KRH16786 | Soybean | plasma membrane | 47.04 | 49.48 |
VIT_06s0004g00800.t01 | Wine grape | plasma membrane | 46.84 | 49.07 |
KRH58913 | Soybean | plasma membrane | 46.64 | 48.96 |
Solyc01g034080.1.1 | Tomato | plasma membrane | 45.45 | 48.94 |
PGSC0003DMT400028298 | Potato | mitochondrion, plasma membrane | 45.26 | 48.72 |
KRH42817 | Soybean | plasma membrane | 45.85 | 48.03 |
CDX75722 | Canola | plasma membrane | 25.3 | 47.41 |
Bra001514.1-P | Field mustard | plasma membrane | 44.66 | 47.38 |
PGSC0003DMT400082047 | Potato | plasma membrane | 44.66 | 47.28 |
CDX82530 | Canola | plasma membrane | 44.47 | 47.17 |
CDX75721 | Canola | plasma membrane | 44.47 | 47.17 |
Os03t0375300-02 | Rice | nucleus | 50.79 | 46.98 |
GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plasma membrane | 42.89 | 46.77 |
AT3G13620.1 | Thale cress | plasma membrane | 44.07 | 46.65 |
CDX97502 | Canola | plasma membrane | 43.87 | 46.54 |
Bra027411.1-P | Field mustard | plasma membrane | 43.87 | 46.54 |
CDY23626 | Canola | plasma membrane | 43.68 | 46.53 |
KRH45451 | Soybean | plasma membrane | 18.38 | 42.86 |
TraesCS5B01G079100.1 | Wheat | golgi, plasma membrane, vacuole | 35.77 | 37.32 |
TraesCS5B01G019600.1 | Wheat | mitochondrion, plasma membrane | 36.36 | 37.17 |
TraesCS6B01G296500.2 | Wheat | plasma membrane | 38.34 | 36.53 |
Protein Annotations
EnsemblPlants:TraesCS3B01G031700.1 | EnsemblPlantsGene:TraesCS3B01G031700 | Gene3D:1.20.1740.10 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0022857 | GO:GO:0055085 | InterPro:AA/rel_permease1 |
PANTHER:PTHR11785 | PANTHER:PTHR11785:SF378 | PFAM:PF13520 | PIRSF:PIRSF006060 | SEG:seg | TMHMM:TMhelix |
MapMan:24.2.3.5.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:14367939..14370645
Molecular Weight (calculated)
54151.5 Da
IEP (calculated)
9.915
GRAVY (calculated)
0.465
Length
506 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTPMIGMCT QLPSLFLDKL ASKLTMNQGI LMTKQSSPTQ SQEQQEQTQL HATVAQQGGG STPSESNHQR RITMIPLVFL IYFEVAGGPY GFEQAVRAAG
101: PLFTLLGFLV FPLAWGVPES LVTAELAAAF PGNGGFVLWA DHAFGPLAGS LLGTWKYLSV VINIAAYPAL VADYLGGVVP AVARPGRART GTVVGMTLLL
201: SLLNYAGLSV VGWGATALGI ASLAPFVLMT AMAVPKVRPR RRAKQVKGRK KDWRLFFNTL FWNLNYWNSA STMAGEVERP ERTFLRALAA AVVLIAASYL
301: LPLMAATGAT DASPDAWVNG YLADAAGIIG GPWLKYWTGA GAVISSIGMF EAQMSSAAFQ LHGMADLGLL PSVFDSHATR TGTPWVAITA STAITIAVSF
401: LGFDNIIATS NFLYSMGTLL EFSSFLWLRV KYPTLKRPYH VPLPLPALMA MCIVPSVFLS YVCVVAGWRV FAIAAGLTAL AVGWHGLMRL CSSKKLLSFR
501: VPESSG
101: PLFTLLGFLV FPLAWGVPES LVTAELAAAF PGNGGFVLWA DHAFGPLAGS LLGTWKYLSV VINIAAYPAL VADYLGGVVP AVARPGRART GTVVGMTLLL
201: SLLNYAGLSV VGWGATALGI ASLAPFVLMT AMAVPKVRPR RRAKQVKGRK KDWRLFFNTL FWNLNYWNSA STMAGEVERP ERTFLRALAA AVVLIAASYL
301: LPLMAATGAT DASPDAWVNG YLADAAGIIG GPWLKYWTGA GAVISSIGMF EAQMSSAAFQ LHGMADLGLL PSVFDSHATR TGTPWVAITA STAITIAVSF
401: LGFDNIIATS NFLYSMGTLL EFSSFLWLRV KYPTLKRPYH VPLPLPALMA MCIVPSVFLS YVCVVAGWRV FAIAAGLTAL AVGWHGLMRL CSSKKLLSFR
501: VPESSG
001: MQKRRIITVN PSASIEMSQY ENNEVPYSSV GADEVPSSPP KATDKIRKVS MLPLVFLIFY EVSGGPFGVE DSVNAAGPLL ALLGFVIFPF IWSIPEALIT
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR
Arabidopsis Description
Probable polyamine transporter At1g31830 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S5]
SUBAcon: [golgi,plasma membrane,mitochondrion]
SUBAcon: [golgi,plasma membrane,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.