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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:
  • golgi 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome, plasma membrane
Any Predictor:golgi, peroxisome, plasma membrane
MultiLoc:golgi
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G321300.1 Wheat golgi, peroxisome, plasma membrane 95.78 95.78
TraesCS5B01G316000.1 Wheat golgi, peroxisome, plasma membrane 94.58 94.58
TraesCS3A01G030900.1 Wheat peroxisome, plasma membrane, vacuole 76.91 79.63
Zm00001d029318_P001 Maize plasma membrane 45.78 75.5
KXG39283 Sorghum plasma membrane 78.31 74.86
Os03t0374900-00 Rice peroxisome, plasma membrane, vacuole 47.59 71.82
Zm00001d029314_P001 Maize plasma membrane 68.88 71.46
TraesCS5A01G315600.1 Wheat extracellular, plasma membrane, vacuole 21.69 71.05
OQU92528 Sorghum plasma membrane 69.48 70.04
HORVU3Hr1G005120.1 Barley cytosol 25.7 61.84
TraesCS7A01G464900.1 Wheat golgi, plasma membrane, vacuole 54.82 56.76
PGSC0003DMT400082048 Potato plasma membrane 50.6 53.28
VIT_06s0004g00790.t01 Wine grape plasma membrane 50.8 53.26
Solyc01g005920.2.1 Tomato plasma membrane 50.0 52.42
KRH72395 Soybean plasma membrane 49.4 52.34
Solyc01g034080.1.1 Tomato plasma membrane 48.39 51.28
PGSC0003DMT400028298 Potato mitochondrion, plasma membrane 48.19 51.06
PGSC0003DMT400082047 Potato plasma membrane 48.59 50.63
KRH16786 Soybean plasma membrane 48.8 50.52
KRH42817 Soybean plasma membrane 49.0 50.52
CDX75722 Canola plasma membrane 27.31 50.37
KRH58913 Soybean plasma membrane 48.39 50.0
VIT_06s0004g00800.t01 Wine grape plasma membrane 48.39 49.9
Bra001514.1-P Field mustard plasma membrane 47.79 49.9
CDX75721 Canola plasma membrane 47.79 49.9
CDY23626 Canola plasma membrane 47.59 49.89
CDX82530 Canola plasma membrane 47.59 49.69
CDX97502 Canola plasma membrane 47.19 49.27
Bra027411.1-P Field mustard plasma membrane 47.19 49.27
AT3G13620.1 Thale cress plasma membrane 47.19 49.16
Os03t0375300-02 Rice nucleus 53.61 48.81
GSMUA_AchrUn_... Banana cytosol, peroxisome, plasma membrane 44.78 48.06
KRH45451 Soybean plasma membrane 18.47 42.4
TraesCS5A01G073000.1 Wheat golgi, plasma membrane, vacuole 39.16 40.21
TraesCS5A01G022700.1 Wheat mitochondrion, plasma membrane 39.96 40.2
TraesCS6A01G269200.2 Wheat plasma membrane 40.36 38.07
Protein Annotations
EnsemblPlants:TraesCS5A01G315000.1EnsemblPlantsGene:TraesCS5A01G315000Gene3D:1.20.1740.10GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0022857GO:GO:0055085InterPro:AA/rel_permease1
PANTHER:PTHR11785PANTHER:PTHR11785:SF378PFAM:PF13520PIRSF:PIRSF006060SEG:segTMHMM:TMhelix
MapMan:24.2.3.5.1:::::
Description
No Description!
Coordinates
chr5A:+:525599564..525602677
Molecular Weight (calculated)
53125.5 Da
IEP (calculated)
8.713
GRAVY (calculated)
0.397
Length
498 amino acids
Sequence
(BLAST)
001: MNQEILTDRQ PPQSEEQGQH PQPHGAVAQE HTPHDQQLQQ GGGPDPTSSG HLRRKITLIP LVFLIYFEVA GGPYGSEKAV RAAGPLFTLL GFLIFPFAWG
101: VPESLVTAEL ATAFPGNGGF VRWADHAFGP LAGSLLGTWK YLSIVINIAA YPALVADYLG GVAPAVAQPG RTRTGTVIAM TLFLSFVNYV GLSIVGWGTV
201: ALGVVSLAPF VLMTAMAVPK VRPRRGAAQV SGRKDWRLFF NTLFWNLNYW DSASTIAGEV ERPERTFPRA LALAVVLIAA SYLLPLMAAT GATDAPPDAW
301: VNGYLADAAG IIGGPWLKYW TGAGAVISSI GMFEAQMSSG SFQLLGMAEL GLVPSVFARR AAYTGTPWVA IAASTTVAIA VSFLGFDDVV ATANFLYSLG
401: TLLEFASFIW LRVKHPALKR PYRVPLPLPA LVAMCAAPSA FLAYVCAVAG WRVFAVAAGL TALGVGWHGI MRECRARKLL RFNNAVAAVH QEDAEDTV
Best Arabidopsis Sequence Match ( AT1G31830.1 )
(BLAST)
001: MQKRRIITVN PSASIEMSQY ENNEVPYSSV GADEVPSSPP KATDKIRKVS MLPLVFLIFY EVSGGPFGVE DSVNAAGPLL ALLGFVIFPF IWSIPEALIT
101: AEMGTMYPEN GGYVVWVSSA LGPFWGFQQG WMKWLSGVID NALYPVLFLD YLKSGVPALG SGLPRVASIL VLTILLTYLN YRGLTIVGWV AVLMGVFSIL
201: PFAVMGLISI PQLEPSRWLV MDLGNVNWNL YLNTLFWNLN YWDSISTLAG EVENPNHTLP KALFYGVILV ACSYIFPLLA GIGAIPLERE KWTDGYFSDV
301: AKALGGAWLR WWVQAAAATS NMGMFIAEMS SDSFQLLGMA ERGMLPEFFA KRSRYGTPLL GILFSASGVV LLSWLSFQEI VAAENLLYCV GMILEFIAFV
401: RMRMKHPAAS RPYKIPIGTT GSILMCIPPT ILICAVVALS SLKVAAVSIV MMIIGFLIHP LLNHMDRKRW VKFSISSDLP DLQQQTREYE ETLIR
Arabidopsis Description
Probable polyamine transporter At1g31830 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S5]
SUBAcon: [mitochondrion,plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.