Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 3
- extracellular 1
- golgi 1
- endoplasmic reticulum 1
- vacuole 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42190 | Canola | golgi, plasma membrane, vacuole | 92.69 | 92.89 |
| Bra038217.1-P | Field mustard | golgi, plasma membrane, vacuole | 92.48 | 92.68 |
| Bra022433.1-P | Field mustard | plasma membrane | 92.28 | 92.28 |
| CDY69762 | Canola | golgi, plasma membrane, vacuole | 92.07 | 92.26 |
| CDY46166 | Canola | plasma membrane | 91.44 | 91.44 |
| CDX99215 | Canola | plasma membrane | 91.65 | 91.08 |
| VIT_03s0091g00600.t01 | Wine grape | plasma membrane | 77.87 | 74.01 |
| KRH77938 | Soybean | plasma membrane | 72.03 | 71.43 |
| PGSC0003DMT400013939 | Potato | plasma membrane | 72.23 | 69.76 |
| Solyc10g049640.1.1 | Tomato | plasma membrane | 70.35 | 68.78 |
| GSMUA_Achr2P13450_001 | Banana | plasma membrane | 50.94 | 65.95 |
| GSMUA_Achr4P28240_001 | Banana | plasma membrane | 53.65 | 62.53 |
| TraesCS5D01G085800.1 | Wheat | golgi, plasma membrane, vacuole | 58.66 | 58.06 |
| EES16229 | Sorghum | plasma membrane | 59.5 | 58.04 |
| TraesCS5A01G073000.1 | Wheat | golgi, plasma membrane, vacuole | 58.66 | 57.94 |
| TraesCS5B01G079100.1 | Wheat | golgi, plasma membrane, vacuole | 58.46 | 57.73 |
| Zm00001d030832_P001 | Maize | plasma membrane | 59.71 | 57.55 |
| Os12t0580400-01 | Rice | plasma membrane | 57.62 | 55.65 |
| AT1G31820.1 | Thale cress | plasma membrane | 53.86 | 53.53 |
| AT5G05630.1 | Thale cress | plasma membrane | 54.7 | 53.47 |
| AT1G31830.1 | Thale cress | golgi, mitochondrion, plasma membrane | 54.91 | 53.13 |
| HORVU5Hr1G019110.1 | Barley | plastid | 58.87 | 50.9 |
| AT3G13620.1 | Thale cress | plasma membrane | 47.18 | 47.28 |
Protein Annotations
| Gene3D:1.20.1740.10 | MapMan:24.2.3.5.1 | EntrezGene:821492 | UniProt:A0A178VGC5 | InterPro:AA/rel_permease1 | ProteinID:AEE76257.1 |
| ArrayExpress:AT3G19553 | EnsemblPlantsGene:AT3G19553 | RefSeq:AT3G19553 | TAIR:AT3G19553 | RefSeq:AT3G19553-TAIR-G | EnsemblPlants:AT3G19553.1 |
| TAIR:AT3G19553.1 | Unigene:At.38389 | ProteinID:BAB01977.1 | GO:GO:0003333 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015171 | GO:GO:0015203 | GO:GO:0015293 | GO:GO:0015297 | GO:GO:0015846 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | GO:GO:1902047 | RefSeq:NP_188589.1 | ProteinID:OAP04718.1 |
| PFAM:PF13520 | PIRSF:PIRSF006060 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR11785 | PANTHER:PTHR11785:SF338 | UniProt:Q9LH39 | TMHMM:TMhelix |
| UniParc:UPI00000AB8DE | SEG:seg | : | : | : | : |
Description
PUT5 [Source:UniProtKB/TrEMBL;Acc:A0A178VGC5]
Coordinates
chr3:-:6790731..6792988
Molecular Weight (calculated)
52845.9 Da
IEP (calculated)
5.096
GRAVY (calculated)
0.515
Length
479 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEEETIVND ENSSKPKPSP KLTLLPLVFL IFYEVSGGPF GVEDSVKSGG GPLLALLGFL IFPLIWSIPE ALVTAELATS FPENGGYVVW ISSAFGPFWG
101: FQEGFWKWFS GVMDNALYPV LFLDYLKHSF PVLDHVAARV PALLVITFSL TYLNYRGLHI VGFSAVVLAV FSLCPFVVMA LLAVPNIRPK RWLFVDTQKI
201: NWRGYFNTMF WNLNYWDKAS TLAGEVDRPG KTFPKALFGA VLLVMGSYLI PLMAGTGALS SSTSGEWSDG YFAEVGMLIG GVWLKGWIQA AAAMSNLGLF
301: EAEMSSDAFQ LLGMSEIGML PAFFAQRSKY GTPTISILCS ATGVIFLSWM SFQEIIEFLN FLYALGMLLE FAAFVKLRIK KPDLHRPYRV PLNTFGVSML
401: CLPPSLLVIL VMVLAAPKTF LISGVIIVLG FCLYPFLTLV KEKQWARFIP EETRPVSGVS SESQLDEEHG DESAASLLP
101: FQEGFWKWFS GVMDNALYPV LFLDYLKHSF PVLDHVAARV PALLVITFSL TYLNYRGLHI VGFSAVVLAV FSLCPFVVMA LLAVPNIRPK RWLFVDTQKI
201: NWRGYFNTMF WNLNYWDKAS TLAGEVDRPG KTFPKALFGA VLLVMGSYLI PLMAGTGALS SSTSGEWSDG YFAEVGMLIG GVWLKGWIQA AAAMSNLGLF
301: EAEMSSDAFQ LLGMSEIGML PAFFAQRSKY GTPTISILCS ATGVIFLSWM SFQEIIEFLN FLYALGMLLE FAAFVKLRIK KPDLHRPYRV PLNTFGVSML
401: CLPPSLLVIL VMVLAAPKTF LISGVIIVLG FCLYPFLTLV KEKQWARFIP EETRPVSGVS SESQLDEEHG DESAASLLP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.