Factsheet for GSMUA_Achr2P13450_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
vacuole 2
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P28240_001	Banana	plasma membrane	72.7	65.45
Bra038217.1-P	Field mustard	golgi, plasma membrane, vacuole	66.22	51.26
VIT_03s0091g00600.t01	Wine grape	plasma membrane	69.73	51.19
CDY42190	Canola	golgi, plasma membrane, vacuole	65.95	51.05
AT3G19553.1	Thale cress	plasma membrane	65.95	50.94
Bra022433.1-P	Field mustard	plasma membrane	65.68	50.73
CDY69762	Canola	golgi, plasma membrane, vacuole	65.41	50.63
CDY46166	Canola	plasma membrane	64.86	50.1
CDX99215	Canola	plasma membrane	65.14	50.0
KRH77938	Soybean	plasma membrane	64.05	49.07
PGSC0003DMT400013939	Potato	plasma membrane	64.59	48.19
Solyc10g049640.1.1	Tomato	plasma membrane	63.24	47.76
TraesCS5D01G085800.1	Wheat	golgi, plasma membrane, vacuole	60.27	46.07
TraesCS5B01G079100.1	Wheat	golgi, plasma membrane, vacuole	59.73	45.57
EES16229	Sorghum	plasma membrane	60.27	45.42
TraesCS5A01G073000.1	Wheat	golgi, plasma membrane, vacuole	59.46	45.36
Zm00001d030832_P001	Maize	plasma membrane	60.54	45.07
Os12t0580400-01	Rice	plasma membrane	60.0	44.76
GSMUA_Achr1P27820_001	Banana	plasma membrane	47.03	40.28
HORVU5Hr1G019110.1	Barley	plastid	59.46	39.71
GSMUA_Achr9P23200_001	Banana	plasma membrane	31.08	36.98
GSMUA_Achr4P11590_001	Banana	plasma membrane	29.73	35.14
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	29.19	23.28

Protein Annotations

Gene3D:1.20.1740.10	MapMan:24.2.3.5.1	InterPro:AA/rel_permease1	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr2G13450_001	EnsemblPlants:GSMUA_Achr2P13450_001	EnsemblPlants:GSMUA_Achr2T13450_001	UniProt:M0S7N6
PIRSF:PIRSF006060	PANTHER:PTHR11785	PANTHER:PTHR11785:SF338	TMHMM:TMhelix	UniParc:UPI00029681BB	SEG:seg

Description

amino acid permease family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G13450_001]

Coordinates

chr2:+:15582260..15585516

Molecular Weight (calculated)

40153.1 Da

IEP (calculated)

4.704

GRAVY (calculated)

0.485

Length

370 amino acids

Sequence
(BLAST)

001: MGEVSATAAE DGSSSPSSVA IPPRPPPKKL AVLPLIALIF YNVSGGPFGV EDSVSAGGGP LLSLLGFLVF PLLWSLPEAL VTAELAASFP ENGGYSLPLF
101: DDPAVRTLAL LVLTAALTFL NYRGLNIVGL SAVALTAFSL SPFVVMSLLA IPRIRPRRWL AVNLQRANFR GYFNSMFWNL NYWDKASTLA GEVEDPSRSF
201: PRAIFGAWTD GYFAQVGMVI GGAWLRWWIQ AAAAMSNMGL FEAEMSSDSF QLLGMSELGM LPAIFGKRSK YGTPTISIMC SATGVIILSW LSFQEIIEFL
301: NFLYSLGMLL ETFIVSGSVM LIGFLIYPAI EHMRNKKCVK FINMLPESCS DTPTVQNQEI VDEASVSLLP

Best Arabidopsis Sequence Match ( AT3G19553.1 )
(BLAST)

001: MGEEETIVND ENSSKPKPSP KLTLLPLVFL IFYEVSGGPF GVEDSVKSGG GPLLALLGFL IFPLIWSIPE ALVTAELATS FPENGGYVVW ISSAFGPFWG
101: FQEGFWKWFS GVMDNALYPV LFLDYLKHSF PVLDHVAARV PALLVITFSL TYLNYRGLHI VGFSAVVLAV FSLCPFVVMA LLAVPNIRPK RWLFVDTQKI
201: NWRGYFNTMF WNLNYWDKAS TLAGEVDRPG KTFPKALFGA VLLVMGSYLI PLMAGTGALS SSTSGEWSDG YFAEVGMLIG GVWLKGWIQA AAAMSNLGLF
301: EAEMSSDAFQ LLGMSEIGML PAFFAQRSKY GTPTISILCS ATGVIFLSWM SFQEIIEFLN FLYALGMLLE FAAFVKLRIK KPDLHRPYRV PLNTFGVSML
401: CLPPSLLVIL VMVLAAPKTF LISGVIIVLG FCLYPFLTLV KEKQWARFIP EETRPVSGVS SESQLDEEHG DESAASLLP

Arabidopsis Description

PUT5 [Source:UniProtKB/TrEMBL;Acc:A0A178VGC5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.