Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400013939 | Potato | plasma membrane | 77.38 | 78.63 |
| CDY42190 | Canola | golgi, plasma membrane, vacuole | 74.21 | 78.24 |
| Bra022433.1-P | Field mustard | plasma membrane | 74.01 | 77.87 |
| AT3G19553.1 | Thale cress | plasma membrane | 74.01 | 77.87 |
| Bra038217.1-P | Field mustard | golgi, plasma membrane, vacuole | 73.81 | 77.82 |
| CDY46166 | Canola | plasma membrane | 73.81 | 77.66 |
| CDY69762 | Canola | golgi, plasma membrane, vacuole | 73.41 | 77.41 |
| CDX99215 | Canola | plasma membrane | 73.61 | 76.97 |
| Solyc10g049640.1.1 | Tomato | plasma membrane | 73.81 | 75.92 |
| KRH77938 | Soybean | plasma membrane | 70.63 | 73.71 |
| GSMUA_Achr2P13450_001 | Banana | plasma membrane | 51.19 | 69.73 |
| GSMUA_Achr4P28240_001 | Banana | plasma membrane | 53.77 | 65.94 |
| EES16229 | Sorghum | plasma membrane | 57.54 | 59.06 |
| Zm00001d030832_P001 | Maize | plasma membrane | 58.13 | 58.95 |
| TraesCS5D01G085800.1 | Wheat | golgi, plasma membrane, vacuole | 56.35 | 58.68 |
| TraesCS5B01G079100.1 | Wheat | golgi, plasma membrane, vacuole | 55.95 | 58.14 |
| TraesCS5A01G073000.1 | Wheat | golgi, plasma membrane, vacuole | 55.75 | 57.94 |
| Os12t0580400-01 | Rice | plasma membrane | 55.56 | 56.45 |
| VIT_02s0033g01310.t01 | Wine grape | plasma membrane | 52.58 | 55.09 |
| VIT_02s0033g01320.t01 | Wine grape | plasma membrane | 50.99 | 54.33 |
| VIT_03s0038g02860.t01 | Wine grape | plasma membrane | 50.6 | 52.69 |
| HORVU5Hr1G019110.1 | Barley | plastid | 56.55 | 51.44 |
| VIT_06s0004g00790.t01 | Wine grape | plasma membrane | 45.63 | 48.42 |
| VIT_06s0004g00800.t01 | Wine grape | plasma membrane | 44.25 | 46.17 |
Protein Annotations
| Gene3D:1.20.1740.10 | EntrezGene:100251585 | wikigene:100251585 | MapMan:24.2.3.5.1 | InterPro:AA/rel_permease1 | ProteinID:CCB47711 |
| ProteinID:CCB47711.1 | ncoils:Coil | UniProt:F6H669 | EMBL:FN595242 | GO:GO:0003333 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0015171 | GO:GO:0015203 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0022857 | GO:GO:0055085 | GO:GO:1902047 | EntrezGene:LOC100251585 | wikigene:LOC100251585 | PFAM:PF13520 |
| PIRSF:PIRSF006060 | PANTHER:PTHR11785 | PANTHER:PTHR11785:SF338 | TMHMM:TMhelix | UniParc:UPI00015CD107 | ArrayExpress:VIT_03s0091g00600 |
| EnsemblPlantsGene:VIT_03s0091g00600 | EnsemblPlants:VIT_03s0091g00600.t01 | RefSeq:XP_002263556 | RefSeq:XP_002263556.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr3:-:7044909..7047565
Molecular Weight (calculated)
55638.3 Da
IEP (calculated)
5.268
GRAVY (calculated)
0.518
Length
504 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEEGIASDV KNTGSKTNPK LTLLPLIALI FYEVSGGPFG VEDSVSAGGG PLLSLLGFLI FPLLWSIPEA LVTAELATSF PENGGYVIWI SAAFGPFWGF
101: QEGFWKWFSG VMDNALYPVL FLDYLKHSFP IFNGLAARIP ALLGITFSLT YLNYRGLHIV GFSAVSLAVF SLCPFIVMSI LSIPRIRPGQ WLVVDFKKVN
201: WRGYFNSMFW NLNYWDKAST LAGEVEDPSR TFPKALLGAV VLVVSSYIIP LLAGTGALRS ASSEWRDGYF AEVGMLIGGF WLKWWIQAAA AMSNMGLFEA
301: EMSSDAFQLL GMSEIGMLPA IFASRSKYGT PTISILCSAT GVIFLSWMSF QEIVEFLNFL YSIGMLLEFA AFIKLRIKKP DLHRPYKVPL QTFGVIMLCL
401: PPSLLLVLVM CLASIRTFLV SGVVIVLGFF LYPTVVHAKD RKWARFVTEQ PAVPSDNILE AHPIMSQLHQ EAADEASVSL IPNLSSTKAE QESELLLEEA
501: LKME
101: QEGFWKWFSG VMDNALYPVL FLDYLKHSFP IFNGLAARIP ALLGITFSLT YLNYRGLHIV GFSAVSLAVF SLCPFIVMSI LSIPRIRPGQ WLVVDFKKVN
201: WRGYFNSMFW NLNYWDKAST LAGEVEDPSR TFPKALLGAV VLVVSSYIIP LLAGTGALRS ASSEWRDGYF AEVGMLIGGF WLKWWIQAAA AMSNMGLFEA
301: EMSSDAFQLL GMSEIGMLPA IFASRSKYGT PTISILCSAT GVIFLSWMSF QEIVEFLNFL YSIGMLLEFA AFIKLRIKKP DLHRPYKVPL QTFGVIMLCL
401: PPSLLLVLVM CLASIRTFLV SGVVIVLGFF LYPTVVHAKD RKWARFVTEQ PAVPSDNILE AHPIMSQLHQ EAADEASVSL IPNLSSTKAE QESELLLEEA
501: LKME
001: MGEEETIVND ENSSKPKPSP KLTLLPLVFL IFYEVSGGPF GVEDSVKSGG GPLLALLGFL IFPLIWSIPE ALVTAELATS FPENGGYVVW ISSAFGPFWG
101: FQEGFWKWFS GVMDNALYPV LFLDYLKHSF PVLDHVAARV PALLVITFSL TYLNYRGLHI VGFSAVVLAV FSLCPFVVMA LLAVPNIRPK RWLFVDTQKI
201: NWRGYFNTMF WNLNYWDKAS TLAGEVDRPG KTFPKALFGA VLLVMGSYLI PLMAGTGALS SSTSGEWSDG YFAEVGMLIG GVWLKGWIQA AAAMSNLGLF
301: EAEMSSDAFQ LLGMSEIGML PAFFAQRSKY GTPTISILCS ATGVIFLSWM SFQEIIEFLN FLYALGMLLE FAAFVKLRIK KPDLHRPYRV PLNTFGVSML
401: CLPPSLLVIL VMVLAAPKTF LISGVIIVLG FCLYPFLTLV KEKQWARFIP EETRPVSGVS SESQLDEEHG DESAASLLP
101: FQEGFWKWFS GVMDNALYPV LFLDYLKHSF PVLDHVAARV PALLVITFSL TYLNYRGLHI VGFSAVVLAV FSLCPFVVMA LLAVPNIRPK RWLFVDTQKI
201: NWRGYFNTMF WNLNYWDKAS TLAGEVDRPG KTFPKALFGA VLLVMGSYLI PLMAGTGALS SSTSGEWSDG YFAEVGMLIG GVWLKGWIQA AAAMSNLGLF
301: EAEMSSDAFQ LLGMSEIGML PAFFAQRSKY GTPTISILCS ATGVIFLSWM SFQEIIEFLN FLYALGMLLE FAAFVKLRIK KPDLHRPYRV PLNTFGVSML
401: CLPPSLLVIL VMVLAAPKTF LISGVIIVLG FCLYPFLTLV KEKQWARFIP EETRPVSGVS SESQLDEEHG DESAASLLP
Arabidopsis Description
PUT5 [Source:UniProtKB/TrEMBL;Acc:A0A178VGC5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.