Factsheet for TraesCS5D01G085800.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plasma membrane, vacuole

Predictor Summary:

golgi 2
extracellular 1
plasma membrane 2
endoplasmic reticulum 1
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	golgi, plasma membrane, vacuole
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G079100.1	Wheat	golgi, plasma membrane, vacuole	98.14	97.94
TraesCS5A01G073000.1	Wheat	golgi, plasma membrane, vacuole	98.14	97.94
HORVU5Hr1G019110.1	Barley	plastid	95.87	83.75
Os12t0580400-01	Rice	plasma membrane	84.71	82.66
EES16229	Sorghum	plasma membrane	82.85	81.67
Zm00001d030832_P001	Maize	plasma membrane	82.44	80.28
GSMUA_Achr2P13450_001	Banana	plasma membrane	46.07	60.27
Bra038217.1-P	Field mustard	golgi, plasma membrane, vacuole	58.06	58.79
AT3G19553.1	Thale cress	plasma membrane	58.06	58.66
CDY42190	Canola	golgi, plasma membrane, vacuole	57.85	58.58
CDY69762	Canola	golgi, plasma membrane, vacuole	57.64	58.37
CDX99215	Canola	plasma membrane	58.06	58.3
Bra022433.1-P	Field mustard	plasma membrane	57.64	58.25
CDY46166	Canola	plasma membrane	57.23	57.83
VIT_03s0091g00600.t01	Wine grape	plasma membrane	58.68	56.35
KRH77938	Soybean	plasma membrane	55.99	56.11
PGSC0003DMT400013939	Potato	plasma membrane	57.23	55.85
Solyc10g049640.1.1	Tomato	plasma membrane	55.58	54.9
GSMUA_Achr4P28240_001	Banana	plasma membrane	46.07	54.26
TraesCS6D01G245700.1	Wheat	plasma membrane	50.62	49.2
TraesCS5D01G028100.1	Wheat	plasma membrane	49.79	48.69
TraesCS5D01G321300.1	Wheat	golgi, peroxisome, plasma membrane	40.29	39.16
TraesCS4D01G344800.1	Wheat	plasma membrane	39.46	37.67
TraesCS7D01G452600.1	Wheat	golgi, plasma membrane, vacuole	38.02	37.47
TraesCS5D01G531700.1	Wheat	mitochondrion, plasma membrane	38.22	35.44
TraesCS5D01G321500.1	Wheat	golgi, mitochondrion, plasma membrane, plastid, vacuole	13.02	32.81
TraesCS5D01G321700.1	Wheat	plasma membrane	12.81	32.29

Protein Annotations

Gene3D:1.20.1740.10	MapMan:24.2.3.5.1	InterPro:AA/rel_permease1	ncoils:Coil	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0022857	GO:GO:0055085
PFAM:PF13520	PIRSF:PIRSF006060	PANTHER:PTHR11785	PANTHER:PTHR11785:SF338	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5D01G085800
EnsemblPlants:TraesCS5D01G085800.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:91341226..91342772

Molecular Weight (calculated)

51559.2 Da

IEP (calculated)

4.939

GRAVY (calculated)

0.587

Length

484 amino acids

Sequence
(BLAST)

001: MTGGGGEDVP APRRRPLTVL PLVALIFYDV SGGPFGIEDS VRAGGGALLP LLGFLILPVL WSLPEALITA ELASAFPTNA GYVAWVSAAF GPAVAFLVGF
101: SKWASGTLDN ALYPVLFLDY LRSSGLALAP PLRSLAVLGL TAALTYLNYR GLHLVGLSAL FLTAFSLSPF VALTVLAIPK IRPSRWLAVN PKAIDPRGYF
201: NSMFWNLNYW DKASTLAGEV DEPRKTFPKA VFGAVALVVG AYLIPLLAGT GALPSETAAE WTDGFFSEVG QRIGGPWLRV WIQAAAAMSN MGLFEAEMSS
301: DSFQLLGMAE MGMIPAIFAR RSRHGTPTYS ILCSATGVVV LSFMSFQEII ELLNFLYGLG MLVVFAAFLK LRFKDPDLPR PYRIPLGSVG AAVMCVPPVL
401: LIGTVMCLAS ATTIVVNIIV LAVGVAMYFG VERLKGSGWV EFLTPVPSDS FHGSSSDDDV EDVRAVLLPA DVPPAQEEVA SKAE

Best Arabidopsis Sequence Match ( AT3G19553.1 )
(BLAST)

001: MGEEETIVND ENSSKPKPSP KLTLLPLVFL IFYEVSGGPF GVEDSVKSGG GPLLALLGFL IFPLIWSIPE ALVTAELATS FPENGGYVVW ISSAFGPFWG
101: FQEGFWKWFS GVMDNALYPV LFLDYLKHSF PVLDHVAARV PALLVITFSL TYLNYRGLHI VGFSAVVLAV FSLCPFVVMA LLAVPNIRPK RWLFVDTQKI
201: NWRGYFNTMF WNLNYWDKAS TLAGEVDRPG KTFPKALFGA VLLVMGSYLI PLMAGTGALS SSTSGEWSDG YFAEVGMLIG GVWLKGWIQA AAAMSNLGLF
301: EAEMSSDAFQ LLGMSEIGML PAFFAQRSKY GTPTISILCS ATGVIFLSWM SFQEIIEFLN FLYALGMLLE FAAFVKLRIK KPDLHRPYRV PLNTFGVSML
401: CLPPSLLVIL VMVLAAPKTF LISGVIIVLG FCLYPFLTLV KEKQWARFIP EETRPVSGVS SESQLDEEHG DESAASLLP

Arabidopsis Description

PUT5 [Source:UniProtKB/TrEMBL;Acc:A0A178VGC5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.