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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 1
  • vacuole 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra022433.1-P Field mustard plasma membrane 99.16 99.16
CDX99215 Canola plasma membrane 97.49 96.89
CDY42190 Canola golgi, plasma membrane, vacuole 92.48 92.68
CDY69762 Canola golgi, plasma membrane, vacuole 92.07 92.26
AT3G19553.1 Thale cress plasma membrane 91.44 91.44
VIT_03s0091g00600.t01 Wine grape plasma membrane 77.66 73.81
KRH77938 Soybean plasma membrane 71.82 71.22
PGSC0003DMT400013939 Potato plasma membrane 73.07 70.56
Solyc10g049640.1.1 Tomato plasma membrane 70.98 69.39
GSMUA_Achr2P13450_001 Banana plasma membrane 50.1 64.86
GSMUA_Achr4P28240_001 Banana plasma membrane 53.44 62.29
CDY63076 Canola endoplasmic reticulum, plasma membrane, vacuole 45.3 57.87
EES16229 Sorghum plasma membrane 59.08 57.64
Zm00001d030832_P001 Maize plasma membrane 59.5 57.34
TraesCS5D01G085800.1 Wheat golgi, plasma membrane, vacuole 57.83 57.23
TraesCS5A01G073000.1 Wheat golgi, plasma membrane, vacuole 57.83 57.11
TraesCS5B01G079100.1 Wheat golgi, plasma membrane, vacuole 57.83 57.11
Os12t0580400-01 Rice plasma membrane 56.78 54.84
CDY12285 Canola golgi, peroxisome, plasma membrane, plastid 56.16 54.02
CDY12286 Canola plasma membrane 43.42 53.2
CDX70141 Canola plasma membrane, plastid 52.82 51.95
CDX98852 Canola plasma membrane, plastid 52.82 51.74
HORVU5Hr1G019110.1 Barley plastid 58.04 50.18
CDX75722 Canola plasma membrane 26.51 47.04
CDX82530 Canola plasma membrane 46.14 46.33
CDX75721 Canola plasma membrane 45.93 46.12
CDY23626 Canola plasma membrane 45.72 46.11
CDX97502 Canola plasma membrane 45.51 45.7
Protein Annotations
Gene3D:1.20.1740.10MapMan:24.2.3.5.1GO:A0A078I8H9UniProt:A0A078I8H9InterPro:AA/rel_permease1EnsemblPlants:CDY46166
ProteinID:CDY46166ProteinID:CDY46166.1GO:GO:0003333GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0015171GO:GO:0016020GO:GO:0016021GO:GO:0022857
GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00083354001PFAM:PF13520PIRSF:PIRSF006060PANTHER:PTHR11785PANTHER:PTHR11785:SF338
TMHMM:TMhelixUniParc:UPI0004EDDF8CSEG:seg:::
Description
BnaA05g20530DBnaA05g20530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I8H9]
Coordinates
chrLK032652:+:97299..99663
Molecular Weight (calculated)
53137.3 Da
IEP (calculated)
4.992
GRAVY (calculated)
0.506
Length
479 amino acids
Sequence
(BLAST)
001: MGEETTANDE NVAKTKPSPK LTLLPLVFLI FYEVSGGPFG VEDSVKSGGG PLLALLGFLI FPLIWSIPEA LITAELATSF PENGGYVVWI SSAFGPFWGF
101: QEGFWKWFSG VMDNALYPVL FLDYLKHSFP ILNHVAARVP ALLIITFSLT YLNYRGLHIV GFSAVLLAVF SLCPFLVMAL LAVPRMRPQR WLFVDFKKVN
201: WRGYLNTMFW NLNYWDKAST LAGEVESPGE TFPKALFGAV LLVMGSYLIP LMAGTGALSE SSSGEWSDGY FAEVGMLIGG VWLKGWIQAA AAMSNLGLFE
301: AEMSSDAFQL LGMSEIGMLP AFFAQRSKYG TPTISILCSA TGVIFLSWLS FQEIIEFLNF LYALGMLLEF AAFVKLRIKK PDLNRPYRVP LNTFGTLLLC
401: LPPSLLVILV MVLAAPKTFL ISGFIIVVGF CLYPFLEFVK EKRWARFIPE DPRRQVLGVQ TESQLDEEHG DESSASLLP
Best Arabidopsis Sequence Match ( AT3G19553.1 )
(BLAST)
001: MGEEETIVND ENSSKPKPSP KLTLLPLVFL IFYEVSGGPF GVEDSVKSGG GPLLALLGFL IFPLIWSIPE ALVTAELATS FPENGGYVVW ISSAFGPFWG
101: FQEGFWKWFS GVMDNALYPV LFLDYLKHSF PVLDHVAARV PALLVITFSL TYLNYRGLHI VGFSAVVLAV FSLCPFVVMA LLAVPNIRPK RWLFVDTQKI
201: NWRGYFNTMF WNLNYWDKAS TLAGEVDRPG KTFPKALFGA VLLVMGSYLI PLMAGTGALS SSTSGEWSDG YFAEVGMLIG GVWLKGWIQA AAAMSNLGLF
301: EAEMSSDAFQ LLGMSEIGML PAFFAQRSKY GTPTISILCS ATGVIFLSWM SFQEIIEFLN FLYALGMLLE FAAFVKLRIK KPDLHRPYRV PLNTFGVSML
401: CLPPSLLVIL VMVLAAPKTF LISGVIIVLG FCLYPFLTLV KEKQWARFIP EETRPVSGVS SESQLDEEHG DESAASLLP
Arabidopsis Description
PUT5 [Source:UniProtKB/TrEMBL;Acc:A0A178VGC5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.